Filter By:

Journal Check one or more journals to show results from those journals only.

Choose more journals

Article type Check one or more article types to show results from those article types only.
Subject Check one or more subjects to show results from those subjects only.
Date Choose a date option to show results from those dates only.

Custom date range

Clear all filters
Sort by:
Showing 1–50 of 139 results
Advanced filters: Author: Gregor Bond Clear advanced filters
  • Stretching experiments on single molecules offer a unique way to study the fundamental theories of statistical mechanics. Researchers have now shown that entangled calix[4]arene dimers can be used in such experiments as a tuneable model system for investigating the strength of hydrogen bonds on a single-molecule level.

    • Matthias Janke
    • Yuliya Rudzevich
    • Andreas Janshoff
    Research
    Nature Nanotechnology
    Volume: 4, P: 225-229
  • PARG and ARH3 are the main hydrolases to reverse serine poly(ADP-ribosylation) yet their activities in the process differ. Here, the authors synthesise linear and branched poly(ADP-ribose) molecules, perform structure-function analysis and elucidate the mechanistic differences between PARG and ARH3.

    • Johannes Gregor Matthias Rack
    • Qiang Liu
    • Ivan Ahel
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-14
  • The P2X4 receptor, an ATP-activated ion channel, plays a role in chronic pain, inflammation, and cancer. Authors in this work discover an extracellular allosteric binding site that interacts with anthraquinone derivatives, and is narrowed by ionic lock formation.

    • Jessica Nagel
    • Vigneshwaran Namasivayam
    • Christa E. Müller
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-20
  • The tuberactinomycin antibiotic family is one of the most effective against multi-drug resistant M. tuberculosis. The structures of two members of this family, viomycin and capreomycin, bound to the ribosome now indicate that they act by stabilizing the A site tRNA in a pre-translocation state and may suggest further avenues for drug development.

    • Robin E Stanley
    • Gregor Blaha
    • Thomas A Steitz
    Research
    Nature Structural & Molecular Biology
    Volume: 17, P: 289-293
  • The structure and function of membrane proteins depend on lipid interactions. Cryo-EM analysis of the actinoporin Fav pore reveals octameric structure binding 112 lipids and clusters of cholesterols. Molecular simulations highlight complex protein-lipid interactions crucial for structure.

    • Gašper Šolinc
    • Marija Srnko
    • Gregor Anderluh
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Tripartite ATP-independent periplasmic (TRAP) transporters use an extra substrate binding protein to transport a variety of substrates in bacteria and archaea. Here the authors use a disulfide engineering approach to lock the TRAP transporter HiSiaPQM from H. influenzae in different conformational states for characterisation.

    • Martin F. Peter
    • Jan A. Ruland
    • Gregor Hagelueken
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-12
  • Optical force emerges when photons change momentum while altering their propagation direction inside curved optical waveguides. The authors demonstrate significant deformation of flexible waveguides induced by the forces exerted by guided light.

    • Gergely T. Iványi
    • Cyril Slabý
    • Gregor Bánó
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Harnessing biomolecular systems to endow synthetic materials with life-like properties is a significant challenge. Here, the authors use the biomolecular KaiABC circadian clock proteins to control autonomous self-assembly and oscillation of colloids.

    • Gregor Leech
    • Lauren Melcher
    • Rae M. Robertson-Anderson
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Molecular glues are monovalent compounds that can recruit a protein of interest to an E3 ligase so the protein of interest can be targeted for degradation. Here, Hughes et al. identify a molecule that selectively and potently degrades BRD9.

    • Scott J. Hughes
    • Wojciech J. Stec
    • Andrea Testa
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Genome recoding with quadruplet codons requires a +1-frameshift-suppressor tRNA able to insert an amino acid at quadruplet codons of interest. Here the authors identify the mechanisms resulting in +1 frameshifting and the steps of the elongation cycle in which it occurs.

    • Howard Gamper
    • Haixing Li
    • Ya-Ming Hou
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-18
  • A novel antiviral targeting the SARS-CoV-2 PLpro protease shows strong efficacy in a mouse model, preventing lung pathology and reducing brain dysfunction. The study provides proof-of-principle that PLpro inhibition may be a viable strategy for preventing and treating long COVID.

    • Stefanie M. Bader
    • Dale J. Calleja
    • David Komander
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-20
  • IL-36 receptor is crucial for host defense and tissue repair. Here, the authors describe identification and characterization of low molecular weight inhibitors of the IL-36 receptor using encoded library technologies. This represents a rare example of small molecules inhibiting a member of IL-1 receptor family.

    • Juraj Velcicky
    • Gregor Cremosnik
    • Georg Martiny-Baron
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-13
  • Here, the authors report cryo-electron microscopy structures of Escherichia coli transcription–translation complexes containing the transcription–translation coupling factor RfaH, showing that RfaH physically bridges RNA polymerase and the ribosome.

    • Vadim Molodtsov
    • Chengyuan Wang
    • Richard H. Ebright
    Research
    Nature Structural & Molecular Biology
    Volume: 31, P: 1932-1941
  • One picosecond after photoactivation, isomerized retinal pulls away from half of its numerous interactions with its binding pocket, and the excess of the photon energy is released through an anisotropic protein breathing motion in the direction of the extracellular space.

    • Thomas Gruhl
    • Tobias Weinert
    • Valerie Panneels
    ResearchOpen Access
    Nature
    Volume: 615, P: 939-944
  • Pore-forming toxins act by forming oligomeric pores in lipid membranes. Here the authors report the crystal structure of the lysenin pore, providing insights into the assembly and function of the pore in addition to suggesting that its properties make lysenin potentially well-suited for nanopore sensing applications.

    • Marjetka Podobnik
    • Peter Savory
    • Gregor Anderluh
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-10
  • A study of dependencies associated with cancer-causing mutations has identified a small molecule that binds to SHOC2 and inhibits RAS signalling in cells carrying NRAS Q61 mutations, a common oncogenic driver in melanoma.

    • Zachary J. Hauseman
    • Frédéric Stauffer
    • Luca Tordella
    ResearchOpen Access
    Nature
    Volume: 642, P: 232-241
  • Structuring organic films is of scientific and technological interest. Here, the authors use partially fluorinated organic molecules exhibiting strong intermolecular interactions to form extended 2D molecular nanosheets and control their shape through growth and desorption kinetics.

    • Maximilian Dreher
    • Pierre Martin Dombrowski
    • Gregor Witte
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-9
  • Here authors show that gamma/beta double polymorph Ga2O3 structures exhibit unprecedently high radiation tolerance accommodating disorder equivalent to hundreds of displacements per atom. Thus, such Ga2O3 structures benchmark a new class of radiation tolerant semiconductors.

    • Alexander Azarov
    • Javier García Fernández
    • Andrej Kuznetsov
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-8
  • Ultrafast time-resolved serial femtosecond crystallography is used to investigate a photodissociation reaction in a protein, revealing the strong impact of the pump laser fluence on the structural changes  and the reaction mechanism.

    • Thomas R. M. Barends
    • Alexander Gorel
    • Ilme Schlichting
    ResearchOpen Access
    Nature
    Volume: 626, P: 905-911
  • The design of highly oxidizing Earth-abundant transition metal complexes for photochemical applications is desirable, but progress in this area remains limited. Now a manganese(IV) diguanidylpyridine complex has been shown to photooxidize naphthalene, benzene and acetonitrile to their radical cations after excitation with near-infrared light. Experimental and theoretical studies indicate the presence of two distinct ligand-to-metal charge transfer excited states.

    • Nathan R. East
    • Robert Naumann
    • Katja Heinze
    Research
    Nature Chemistry
    Volume: 16, P: 827-834
  • The charge-transfer characteristics of conjugated molecules are important in determining their electronic properties. Using resonant photoemission spectroscopy, Batraet al. quantify the through-space charge transfer in two model conjugated systems with femtosecond resolution.

    • Arunabh Batra
    • Gregor Kladnik
    • Latha Venkataraman
    Research
    Nature Communications
    Volume: 3, P: 1-7
  • Epithelial cell adhesion protein (EpCAM) is a cell–cell adhesion molecule that is often used as a cancer cell marker. Here, Pavšič et al.solve the structure of a dimer of the extracellular domain of EpCAM, explain several aspects of its biology and comment on the antigenicity of its epitopes.

    • Miha Pavšič
    • Gregor Gunčar
    • Brigita Lenarčič
    Research
    Nature Communications
    Volume: 5, P: 1-10
  • Pyroptosis has been implicated in many diseases with aberrant inflammation. Here, Kopp et al. characterize single-chain nanobodies targeting the human gasdermin D protein as tools to inhibit pyroptosis.

    • Anja Kopp
    • Gregor Hagelueken
    • Matthias Geyer
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-13
  • The biosynthesis of the methylated sesquiterpene sodorifen, which features a cryptic methylation pattern, has now been studied through extensive labelling experiments and computational chemistry. The methyl group formation is now understood to come from methylene carbons of the substrate farnesyl diphosphate and the absolute configuration of the biosynthetic intermediate presodorifen diphosphate has been revised.

    • Houchao Xu
    • Lukas Lauterbach
    • Jeroen S. Dickschat
    Research
    Nature Chemistry
    Volume: 15, P: 1164-1171
  • Shuttle catalysis is a promising approach to improve traditional hydrofunctionalization reactions, although thermodynamic constraints limit its application. Here the authors show how the properties of zeolites can drive the shuttling equilibrium of such catalytic processes, widening the applicability of reactions such as transfer hydrocyanation and transfer hydroformylation.

    • Jesse Dallenes
    • Jonas Wuyts
    • Dirk De Vos
    Research
    Nature Catalysis
    Volume: 6, P: 495-505
  • Retrofitting is recognized as a powerful tool to control the structure and the corresponding functionality in MOFs. Here, the authors develop a low-cost computational framework to guide experimentalists for retrofitting experiments in MOFs and test it on the prototypical Cu3BTC2 MOF.

    • Christian Schneider
    • David Bodesheim
    • Gregor Kieslich
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-10
  • The cysteine-rich peptides LUREs play an essential role in pollen tube attraction to the ovule for plant sexual reproduction. Here Zhang et al. show that PRK6 functions as a receptor of the LUREs in Arabidopsis thaliana and reveal the ligand recognition mechanism.

    • Xiaoxiao Zhang
    • Weijia Liu
    • Jijie Chai
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-9
  • The bacterium Listeria monocytogenes possesses two major virulence factors, broad-range phospholipase C (LmPC-PLC) and the pore-forming toxin listeriolysin O (LLO). Here, authors perform structural and biochemical analysis of LmPC-PLC and show that unique structural features enable self-regulation of its enzymatic activity and positive synergy with the pore-forming toxin listeriolysin O.

    • Nejc Petrišič
    • Maksimiljan Adamek
    • Marjetka Podobnik
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-17
  • Visualizing the structural dynamics of isolated molecules would help to understand chemical reactions, but this is difficult for complex structures. Intense femtosecond X-ray pulses allow the full imaging of exploding photoionized molecules, in this case, with eleven atoms.

    • Rebecca Boll
    • Julia M. Schäfer
    • Till Jahnke
    ResearchOpen Access
    Nature Physics
    Volume: 18, P: 423-428
  • Batatia and colleagues introduce a computational framework that combines message-passing networks with the atomic cluster expansion architecture and incorporates a many-body description of the geometry of molecular structures. The resulting models are interpretable and accurate.

    • Ilyes Batatia
    • Simon Batzner
    • Gábor Csányi
    ResearchOpen Access
    Nature Machine Intelligence
    Volume: 7, P: 56-67
  • The pathogen Legionella pneumophila mediates NAD+-dependent ubiquitination pathways upon infection. Here, the authors show the Legionella effector MavL reverses ubiquitin ADP-ribosylation to regulate these pathways. MavL represents a new macrodomain class specific for reversal of arginine ADP-ribosylation with distinct ADP-ribose binding features.

    • Zhengrui Zhang
    • Jiaqi Fu
    • Chittaranjan Das
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-17
  • Acoustic force spectroscopy applies acoustic forces across a large dynamic range for highly multiplexed single-molecule measurements in a simple, compact setup.

    • Gerrit Sitters
    • Douwe Kamsma
    • Gijs J L Wuite
    Research
    Nature Methods
    Volume: 12, P: 47-50
  • Surface currents in topological insulators can be controlled by light, but the underlying mechanisms are not well understood. Here, Braun et al. report an ultrafast shift photocurrent at the surface of Ca-doped Bi2Se3, whereas injection currents are much smaller than expected from asymmetric depopulation of the Dirac cone.

    • Lukas Braun
    • Gregor Mussler
    • Tobias Kampfrath
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-9
  • A sustainability scenario yields major co-benefits compared to technical solution-focused scenarios, leaving 386 Tg CO2eq/yr of GHG to be released while air pollutants from open burning can be eliminated before 2050, finds study on implementation of circular municipal waste management systems.

    • Adriana Gómez-Sanabria
    • Gregor Kiesewetter
    • Helmut Haberl
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-12
  • MOF glass nanocomposites allow researchers to study lead halide perovskites’ bulk and interfacial regions in relation to their optoelectronic properties. Here authors provide insights for the advancement of stable and efficient perovskite optoelectronic devices design.

    • Xuemei Li
    • Wengang Huang
    • Jingwei Hou
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-12
  • This study explores ATG4-dependent delipidation of ATG8 in autophagosome formation, finding it crucial in Chlamydomonas reinhardtii but unnecessary in Arabidopsis thaliana. This underscores the evolutionary differences in autophagy mechanisms across eukaryotic species.

    • Yong Zou
    • Jonas A. Ohlsson
    • Elena A. Minina
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-19