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Showing 201–250 of 1015 results
Advanced filters: Author: Jay M. Short Clear advanced filters
  • RNA vaccines have been associated with high reactogenicity. Mellman and colleagues demonstrate that lipid-formulated RNA vaccines trigger IL-1 production and inflammation in humans but this pathway is dampened in mice.

    • Siri Tahtinen
    • Ann-Jay Tong
    • Ira Mellman
    Research
    Nature Immunology
    Volume: 23, P: 532-542
  • An analysis of the Drosophila connectome yields all cell types intrinsic to the optic lobe, and their rules of connectivity.

    • Arie Matsliah
    • Szi-chieh Yu
    • Gregory S. X. E. Jefferis
    ResearchOpen Access
    Nature
    Volume: 634, P: 166-180
  • There’s an emerging body of evidence to show how biological sex impacts cancer incidence, treatment and underlying biology. Here, using a large pan-cancer dataset, the authors further highlight how sex differences shape the cancer genome.

    • Constance H. Li
    • Stephenie D. Prokopec
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-24
  • Some cancer patients first present with metastases where the location of the primary is unidentified; these are difficult to treat. In this study, using machine learning, the authors develop a method to determine the tissue of origin of a cancer based on whole sequencing data.

    • Wei Jiao
    • Gurnit Atwal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Multi-omics datasets pose major challenges to data interpretation and hypothesis generation owing to their high-dimensional molecular profiles. Here, the authors develop ActivePathways method, which uses data fusion techniques for integrative pathway analysis of multi-omics data and candidate gene discovery.

    • Marta Paczkowska
    • Jonathan Barenboim
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • A major barrier to climate mitigation is the political polarization of climate change. Here, the authors examine which of several interventions increase people’s climate policy support and climate action across ideological boundaries.

    • Michael Berkebile-Weinberg
    • Danielle Goldwert
    • Madalina Vlasceanu
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-12
  • Can individuals be motivated to accurately identify misinformation? Across four experiments, Rathje et al. provide support for financial incentives improving accuracy, and reducing partisan bias in judgements of political news headlines.

    • Steve Rathje
    • Jon Roozenbeek
    • Sander van der Linden
    ResearchOpen Access
    Nature Human Behaviour
    Volume: 7, P: 892-903
  • In this study the authors consider the structural variants (SVs) present within cancer cases of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium. They report hundreds of genes, including known cancer-associated genes for which the nearby presence of a SV breakpoint is associated with altered expression.

    • Yiqun Zhang
    • Fengju Chen
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-14
  • QS-21—an FDA-approved vaccine adjuvant—and several structural analogues of QS-21 can be synthesized in engineered yeast strains, and this process is much less laborious compared with the conventional mode of extraction from the Chilean soapbark tree.

    • Yuzhong Liu
    • Xixi Zhao
    • Jay D. Keasling
    ResearchOpen Access
    Nature
    Volume: 629, P: 937-944
  • Cancers evolve as they progress under differing selective pressures. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, the authors present the method TrackSig the estimates evolutionary trajectories of somatic mutational processes from single bulk tumour data.

    • Yulia Rubanova
    • Ruian Shi
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • As the next solar eclipse approaches, Jay M. Pasachoff and Roberta J. M. Olson ponder how artists from the early Renaissance onwards have interpreted the phenomenon.

    • Jay M. Pasachoff
    • Roberta J. M. Olson
    Books & Arts
    Nature
    Volume: 508, P: 314-315
  • Toll-like receptor 7 (TLR7) normally recognizes exogenous single-stranded RNA for the activation of innate immunity. Here the authors show that TLR7 may also contribute, via the modulation of mast cell functions, to experimental, cigarette smoke-induced mouse models of emphysema, thereby hinting TLR7 as a potential therapeutic target for human lung inflammation.

    • Gang Liu
    • Tatt Jhong Haw
    • Philip M. Hansbro
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-24
  • In plants, light-dependent activation fatty acid synthesis (FAS) is mediated in part by acetyl-CoA carboxylase (ACCase). Here the authors identify a family of genes encoding carboxyltransferase interactors that attenuate FAS in the light by docking acetyl-CoA carboxylase to the plastid envelope.

    • Yajin Ye
    • Krisztina Nikovics
    • Jay J. Thelen
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-14
  • Spin-orbit torques, arising in systems with strong spin-orbit interactions, have been a major avenue of research for the potential electric control of magnetization. Recently, unconventional spin-orbit torques, with spin polarizations aligned in atypical ways have garnered interest due to the numerous advantages offered compared to their conventional counterparts. Here, Xue et al investigate ‘type-x’ spin-orbit torque switching, demonstrating both unique spin polarizations, and field-free magnetization switching in Platinum/Cobalt multilayers.

    • Fen Xue
    • Shy-Jay Lin
    • Shan X. Wang
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-9
  • The DNA-binding domains of transcription factors have been well characterized, but whether their intrinsically disordered regions control cell fate is unclear. Here, the authors show the functional and mechanistic importance of an intrinsically disordered region of TCF-1 in T cell development.

    • Naomi Goldman
    • Aditi Chandra
    • Golnaz Vahedi
    Research
    Nature Immunology
    Volume: 24, P: 1698-1710
    • Stephen Jay Gould
    Books & Arts
    Nature
    Volume: 313, P: 505-506
  • Potent CRISPR guides targeting conserved dengue virus regions can treat dengue-2 and -3 infection in vivo in mice when co-delivered with Cas13 by lipid nanoparticles.

    • Mausumi Basu
    • Chiara Zurla
    • Philip J. Santangelo
    Research
    Nature Microbiology
    Volume: 9, P: 2160-2172
  • Fungi have the potential to produce sustainable foods for a growing population, but current products are based on a small number of strains with inherent limitations. Here, the authors develop genetic tools for an edible fungus and engineer its nutritional value and sensory appeal for alternative meat applications.

    • Vayu Maini Rekdal
    • Casper R. B. van der Luijt
    • Jay D. Keasling
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-18
  • Experimental analysis of reconstructed ancestral globins reveals that haemoglobin’s complex tetrameric structure and oxygen-binding functions evolved by simple genetic and biophysical mechanisms.

    • Arvind S. Pillai
    • Shane A. Chandler
    • Joseph W. Thornton
    Research
    Nature
    Volume: 581, P: 480-485
  • By applying Hi-C to cells derived from the tumors of 24 GBM patients, the authors show pervasive structural variation in GBM chromosomal organization. How such patient-to-patient variation explains the characteristic gene expression patterns in each tumor is investigated.

    • Ting Xie
    • Adi Danieli-Mackay
    • Argyris Papantonis
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-16
  • A yeast platform for de novo biosynthesis of medicinal plant compounds has now been reported. The platform was used to explore the biocatalytic potential of refactored plant pathways and resulted in the production of 19 halogenated derivatives with therapeutic potential.

    • Samuel A. Bradley
    • Beata J. Lehka
    • Michael K. Jensen
    ResearchOpen Access
    Nature Chemical Biology
    Volume: 19, P: 1551-1560
  • Mutations of hCdc73, a component of the PAFc complex that regulates RNA polymerase II-dependent transcription, have been associated with parathyroid carcinoma. Here the authors show that hCdc73 regulates the mRNA stability of p53 through the interaction with eEF1Bγ, a translation elongation complex subunit, and hSki8, a component of mRNA decay complex.

    • Jay-Hyun Jo
    • Tae-Moon Chung
    • Joo-Yeon Yoo
    Research
    Nature Communications
    Volume: 5, P: 1-12
  • Computational methods are used to predict which peptides or antigens are able to bind to MHC in order to activate T cell receptors in neoantigen-directed immunotherapies. Here the authors present an accurate transformer-based method to consider not only the peptide and MHC but also the source antigenic protein to predict peptides which bind to MHC molecules.

    • William John Thrift
    • Nicolas W. Lounsbury
    • Suchit Jhunjhunwala
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-16
  • Electron microscopy (EM) is the gold standard for biological ultrastructure but acquisition speed is slow, making it unsuitable for large volumes. Here the authors present a parallel imaging pipeline for continuous autonomous imaging with six transmission EMs to image 1 mm3 of mouse cortex in less than 6 months.

    • Wenjing Yin
    • Derrick Brittain
    • Nuno Macarico da Costa
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Hydroxyglutarate synthase (HglS) converts 2-oxoadipate to D-2- hydroxyglutarate during lysine catabolism in bacteria. Here the authors use structural and biochemical approaches to show that HglS acts via successive decarboxylation and intramolecular hydroxylation and that homologous enzymes catalyze the final step of lysine catabolism in plants.

    • Mitchell G. Thompson
    • Jacquelyn M. Blake-Hedges
    • Jay D. Keasling
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • Population mobility is associated with SARS-CoV-2 transmission but its impacts on other respiratory viruses are not well understood. Here, the authors investigate associations between mobile phone-derived mobility metrics and the dynamics of 18 respiratory viruses in Seattle, Washington from 2018 to 2022.

    • Amanda C. Perofsky
    • Chelsea L. Hansen
    • Cécile Viboud
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-17
  • In chocolate production, a complicated tempering process is used to guide the crystallization of cocoa butter towards its most desirable polymorph, which gives the chocolate proper melting behavior, gloss, and snap—hallmarks of good quality chocolate. Here, the authors find that simply adding a specific phospholipid also directs crystallization towards this polymorph, producing chocolate with comparable microstructure and properties to tempered chocolate.

    • Jay Chen
    • Saeed M. Ghazani
    • Alejandro G. Marangoni
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-9
  • A pioneer in oculomotor neuroscience, Edward L. Keller identified key elements of the brainstem circuits that produce eye movements and provided the foundation for decades of research on neural control of gaze. He passed away on 4 July 2025.

    • Neeraj J. Gandhi
    • Stephen J. Heinen
    • Robert M. McPeek
    Comments & Opinion
    Nature Neuroscience
    Volume: 28, P: 2404-2405
  • A promising strategy for scaling trapped-ion-based quantum technologies is to use fully integrated optical waveguides to deliver light to numerous ions at multiple sites. Here, the authors. optically address three ions using on-chip waveguides to deliver three distinct wavelengths per ion, and perform Rabi flopping on each ion simultaneously.

    • Joonhyuk Kwon
    • William J. Setzer
    • Hayden J. McGuinness
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-9
  • Mammalian genomes are scattered with repetitive sequences, but their biology remains largely elusive. Here, the authors show that transcription can initiate from short tandem repetitive sequences, and that genetic variants linked to human diseases are preferentially found at repeats with high transcription initiation level.

    • Mathys Grapotte
    • Manu Saraswat
    • Charles-Henri Lecellier
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-18
    • K. E. B. JAY
    Books & Arts
    Nature
    Volume: 187, P: 273
  • Community pharmacists are accessible healthcare providers with expertise in medication management. Here the authors show that a low-carbohydrate, low-energy diet implemented by community pharmacists reduced diabetes medication use and improved glucose control in people with type 2 diabetes.

    • Cody Durrer
    • Sean McKelvey
    • Jonathan P. Little
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-8
  • Recent work found that overexpression of short hairpin RNAs in cells could lead to mortality in mice, this was attributed to interference with the cellular machinery that makes miRNAs. This raised the issue of whether RNA interference-mediated silencing would be therapeutically possible. This paper shows that small interfering RNAs can be systemically administered and effectively suppress gene expression without compromising the activity of various liver miRNAs.

    • Matthias John
    • Rainer Constien
    • David Bumcrot
    Research
    Nature
    Volume: 449, P: 745-747
  • Cell therapy requires the targeting of cells to specific sites in the body. Here Muthana et al.use a standard MRI scanner to direct oncolytic macrophages, labelled with magnetic nanoparticles, to primary and metastatic tumour sites in mice, and demonstrate that this leads to reduced tumour growth.

    • Munitta Muthana
    • Aneurin J. Kennerley
    • Claire Lewis
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-11
  • Frictional motion between two surfaces in contact starts with the formation of nucleating rupture fronts. It is now shown that these emerge from nucleation fronts, which develop from a certain stress level onwards and with a characteristic velocity.

    • Shahar Gvirtzman
    • Jay Fineberg
    Research
    Nature Physics
    Volume: 17, P: 1037-1042
  • The MAPK pathway is an important therapeutic target in pancreatic ductal adenocarcinoma (PDAC), but success is limited by pathway reactivation, which drives resistance. Here, the authors investigate the mechanism underlying HER2-reactivation post KRAS-MAPK inhibition, identifying combination of MAPK and HER2 inhibition as a therapeutic strategy.

    • Ashenafi Bulle
    • Peng Liu
    • Kian-Huat Lim
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-18
  • Combination of TCR or CAR T cells expressing the engineered CD47 variant 47E with anti-CD47 antibody therapy results in synergistic antitumour efficacy due to T cell resistance to clearance by macrophages, while maintaining macrophage recruitment into the tumour microenvironment.

    • Sean A. Yamada-Hunter
    • Johanna Theruvath
    • Crystal L. Mackall
    ResearchOpen Access
    Nature
    Volume: 630, P: 457-465