Filter By:

Journal Check one or more journals to show results from those journals only.

Choose more journals

Article type Check one or more article types to show results from those article types only.
Subject Check one or more subjects to show results from those subjects only.
Date Choose a date option to show results from those dates only.

Custom date range

Clear all filters
Sort by:
Showing 1–50 of 86 results
Advanced filters: Author: Michael Widom Clear advanced filters
  • Within the phase diagram of pure substances, the supercritical state is not fully understood. Here the authors experimentally observe a gas-like to liquid-like crossover in the self-dynamics of supercritical fluid methane upon pressure increase.

    • Umbertoluca Ranieri
    • Ferdinando Formisano
    • Livia E. Bove
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-10
  • Here, the authors provide molecular insight into the remarkable ability of Tardigrades to withstand high levels of radiation by demonstrating that their Dsup protein interacts with multiple surfaces of the nucleosome to protect the genome from oxidative DNA damage.

    • Rhiannon R. Aguilar
    • Laiba F. Khan
    • Jessica K. Tyler
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • Internucleosomal linker length alters the stability and dynamics of chromatin condensates by shifting the balance between inter- and intramolecular interactions. Further, by changing the linker lengths, a remodeler can induce or suppress chromatin phase separation.

    • Lifeng Chen
    • M. Julia Maristany
    • Michael K. Rosen
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-18
  • Human acetyltransferases MOZ and MORF mediate development programs and are dysregulated in diseases. Here the authors identified two winged helix (WH) domains in MORF/MOZ and characterized their DNA binding functions, including targeting of CpG by WH1.

    • Dustin C. Becht
    • Brianna J. Klein
    • Tatiana G. Kutateladze
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-20
  • Human Microrchidia 4 (MORC4) ATPase has been implicated in acute and chronic pancreatitis, inflammatory disorders and cancer. Here the authors describe the structure–function relationship of MORC4 and define the molecular mechanism for MORC4 activation.

    • Adam H. Tencer
    • Khan L. Cox
    • Tatiana G. Kutateladze
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • The MuvB protein complex regulates genes that are differentially expressed through the cell cycle, yet its precise molecular function has remained unclear. Here the authors reveal MuvB associates with the nucleosome adjacent to the transcription start site of cell-cycle genes and that the tight positioning of this nucleosome correlates with MuvB-dependent gene repression.

    • Anushweta Asthana
    • Parameshwaran Ramanan
    • Seth M. Rubin
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-15
  • The chromatin remodeller CHD4 contains two PHD finger reader domains that have been shown to bivalently recognize H3 histone tails. Here, the authors describe a mechanism by which the PHD fingers bind to the intact nucleosome core particle, revealing both cooperative and individual interactions.

    • Jovylyn Gatchalian
    • Xiaodong Wang
    • Tatiana G. Kutateladze
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-10
  • Cryo-EM structures and analysis provide insight into the mechanisms by which basic helix–loop–helix transcription factors access E-box DNA sequences that are embedded within nucleosomes, and cooperate with other transcription factors.

    • Alicia K. Michael
    • Lisa Stoos
    • Nicolas H. Thomä
    ResearchOpen Access
    Nature
    Volume: 619, P: 385-393
  • JADE is a subunit of human acetyltransferase complex HBO1 that is essential in transcriptional regulation. Gaurav et al. characterize the molecular mechanism by which JADE mediates genomic association and enzymatic and pathological activities of the HBO1 complex.

    • Nitika Gaurav
    • Akinori Kanai
    • Tatiana G. Kutateladze
    Research
    Nature Structural & Molecular Biology
    Volume: 31, P: 1039-1049
  • Developing capture materials and processes that reduce the energy required to separate carbon dioxide from flue gas in power plants is an important area of research. A computational approach to rank adsorbents for their performance in carbon dioxide capture and storage is now proposed, which will enable hundreds of thousands of zeolitic structures to be screened.

    • Li-Chiang Lin
    • Adam H. Berger
    • Berend Smit
    Research
    Nature Materials
    Volume: 11, P: 633-641
  • Mutations of the histone H3K36-specific methyltransferase ASH1L have been linked to several human diseases. Here, the authors report the mechanism by which three C-terminal domains in ASH1L regulate its enzymatic activity and interact with chromatin.

    • Kendra R. Vann
    • Rajal Sharma
    • Tatiana G. Kutateladze
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Binding of the Tudor domain of the PHD finger protein PHF1 to H3K36me3 inhibits Polycomb PRC2 complex methyltransferase activity. Here, Musselman et al.characterize this interaction in the context of the full nucleosome and show dual binding of the PHF1 Tudor domain to H3K36me3 and double-stranded DNA.

    • Catherine A. Musselman
    • Matthew D. Gibson
    • Tatiana G. Kutateladze
    Research
    Nature Communications
    Volume: 4, P: 1-9
  • Chromosomal translocations involving the AF10 gene, especially with CALM, are associated with aggressive leukemias. Here the authors show that the PZP domain of AF10, a histone reader, is always excluded/impaired in AF10 fusions, whereas incorporation of this domain downregulates Hoxa genes and blocks leukemogenesis.

    • Brianna J. Klein
    • Anagha Deshpande
    • Tatiana G. Kutateladze
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-15
  • Cystic fibrosis imposes a decline in quality of life but new treatments are being developed that target specificCFTRvariants. Here the authors identify five genome loci significantly associated with variation in disease severity in a meta-analysis, which may provide targets for individualized treatment of cystic fibrosis.

    • Harriet Corvol
    • Scott M. Blackman
    • Michael R. Knowles
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-8
  • MLL family histone methyltransferases deposit histone H3 Lys4 mono-/di-/tri-methylation and regulate gene expression in mammals. Here the authors report the single-particle cryo-EM structure of the NCP-bound human MLL1 core complex, shedding light on how the MLL1 complex engages chromatin and how chromatin binding promotes MLL1 tri-methylation activity.

    • Sang Ho Park
    • Alex Ayoub
    • Uhn-Soo Cho
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-13
  • Fewer than 100 wild Cat Ba langurs survive in Vietnam. Here, the authors use whole genome sequencing to demonstrate potential adaptations to saltwater consumption as well as maintenance of adaptive potential despite low levels of genetic diversity and high levels of inbreeding.

    • Liye Zhang
    • Neahga Leonard
    • Christian Roos
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-14
  • Single-cell ATAC-seq data is challenging to analyse for reasons such as high dimensionality and sparsity. Here, the authors develop SCALE, a deep learning method that leverages latent feature extraction for various tasks of scATACseq data analysis.

    • Lei Xiong
    • Kui Xu
    • Qiangfeng Cliff Zhang
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-10
  • Although loss of BRCA1 leads to defects in DNA double-strand break repair by homologous recombination (HR) and renders cells hypersensitive to PARP inhibitors, resistance to the drugs can arise. Here the authors reveal that PALB2 chromatin recruitment restores HR in BRCA1-deficient cells depleted of 53BP1.

    • Rimma Belotserkovskaya
    • Elisenda Raga Gil
    • Stephen P. Jackson
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-11
  • The linker histone H1 is highly abundant and regulates DNA accessibility by compacting chromatin. Here the authors analyze transcription factor binding to nucleosomes and show that histone H1 suppresses unwrapping but does not directly block the binding of transcription factors.

    • Morgan Bernier
    • Yi Luo
    • Michael G. Poirier
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-10
  • Ubiquitination of histone H2A can occur on distinct lysine residues, but how each site is recognised by the specific E3 ligase remains poorly understood. Here the authors demonstrate that the E3 ligase RNF168 binds the acidic patch on the nucleosome surface, directing the E2 to the target lysine K13/K15.

    • Velten Horn
    • Michael Uckelmann
    • Hugo van Ingen
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-12
  • The E3 ubiquitin ligase RNF168 ubiquitinates specific lysines on histone H2A as part of the DNA damage response. Here, the authors show that the acidic patch on the histone H2A/H2B dimer catalyses RNF168-dependent ubiquitination of histone 2A by redirecting ubiquitination activity towards the relevant target lysines.

    • Francesca Mattiroli
    • Michael Uckelmann
    • Titia K. Sixma
    ResearchOpen Access
    Nature Communications
    Volume: 5, P: 1-11
  • Genome-wide analyses identify variants associated with sinus node dysfunction, distal conduction disease and pacemaker implantation, implicating ion channel function, cardiac developmental programs and sarcomeric structure in bradyarrhythmia susceptibility.

    • Lu-Chen Weng
    • Joel T. Rämö
    • Steven A. Lubitz
    ResearchOpen Access
    Nature Genetics
    Volume: 57, P: 53-64
  • Durable agonism of NPR1 achieved with a novel investigational monoclonal antibody could mirror the positive hemodynamic changes in blood pressure and heart failure identified in humans with lifelong exposure to NPR1 coding variants.

    • Michael E. Dunn
    • Aaron Kithcart
    • Lori Morton
    ResearchOpen Access
    Nature
    Volume: 633, P: 654-661
  • Risk for renal cell carcinoma (RCC) is higher when there are first-degree family members with the disease. Here, Scelo and colleagues perform a genome-wide association meta-analysis and new genome-wide scan to identify seven new loci with significant RCC association.

    • Ghislaine Scelo
    • Mark P. Purdue
    • Stephen J. Chanock
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-9
  • Here authors use calorimetry to quantify chemical short-range order (CSRO) experimentally, in good agreement with atomistic simulations. Synchrotron in-situ tensile testing showed no effect of varied CSRO levels on mechanical properties.

    • Vinícius P. Bacurau
    • Pedro A. F. P. Moreira
    • Francisco G. Coury
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-11
  • The polycomb repressive complex 2 (PRC2) is a histone methyltransferase regulating cell differentiation and identity. Here, the authors show that the vertebrate-specific PRC2 accessory subunit PALI1 facilitates substrate binding by the complex and elucidate the allosteric mechanism of PALI1- mediated PRC2 activation.

    • Qi Zhang
    • Samuel C. Agius
    • Chen Davidovich
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-18
  • Methane is abundant in the Universe, is an important energy carrier and a model system for fundamental studies. Here, the authors measure the self-diffusion coefficient of supercritical methane at ambient temperature up to the freezing pressure, and find a different behavior than expected based on previous models.

    • Umbertoluca Ranieri
    • Stefan Klotz
    • Livia E. Bove
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-9
  • MDC1 and H2AX interact and accumulate at sites of DNA damage, functioning to recruit additional factors involved in the repair process. Here the authors uncover a function for MDC1 that is independent of the presence of H2AX and is mediated through its PST-repeat region.

    • Israel Salguero
    • Rimma Belotserkovskaya
    • Stephen P. Jackson
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-11
  • Killer whales have evolved into specialized ecotypes based on hunting strategies and ecological niches. Here, Andrew Foote and colleagues sequenced the whole genome of individual killer whales representing 5 different ecotypes from North Pacific and Antarctic, and show expansion of small founder groups to adapt to specific ecological niches.

    • Andrew D. Foote
    • Nagarjun Vijay
    • Jochen B.W. Wolf
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-12
  • Nucleosomes can interfere with DNA binding by factors, but previous work showed that protein-binding sites on a single nucleosome are accessible. Dynamics in the context of higher-order chromatin structure are now examined, with compaction dynamics and DNA-binding site exposure on a centrally placed nucleosome in an array assessed.

    • Michael G Poirier
    • Eugene Oh
    • Jonathan Widom
    Research
    Nature Structural & Molecular Biology
    Volume: 16, P: 938-944
  • Heart failure is a complex syndrome that is associated with many different underlying risk factors. Here, to increase power, the authors jointly analyse cases of heart failure of different aetiologies in a genome-wide association study and identify 11 loci of which ten had not been previously reported.

    • Sonia Shah
    • Albert Henry
    • R. Thomas Lumbers
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Chromosomal single-strand DNA breaks occur frequently and require repair to avoid disease outcomes. Here, the authors show that in bird cells, PARP3 accelerates this repair, and use structural biology and cell biology techniques to reveal details of the mechanism of action.

    • Gabrielle J. Grundy
    • Luis M. Polo
    • Keith W. Caldecott
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-12
  • Advanced screening strategies for the design of high-entropy alloys are highly desirable. Here the authors use the project-oriented design strategy and CALPHAD-based high-throughput calculation tool to rapidly screen promising Al-Cr-Fe-Mn-Ti structural HEAs for high-temperature applications.

    • Rui Feng
    • Chuan Zhang
    • Peter K. Liaw
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-10