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Showing 1–3 of 3 results
Advanced filters: Author: Moinuddin Chowdhury Clear advanced filters

  • Using MPXV genomes specific to New York City, phylogenetic clusters were identified. Most mutations were driven by ABOBEC3. The prevalence of coinfections with distinct strains was ~4.2% and results may improve MPXV genomic epidemiology applications.

    • Saymon Akther
    • Michelle Su
    • Enoma Omoregie
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14

  • Here, the authors characterize a case of SARS-CoV-2 superinfection with Alpha and Epsilon variants, in which, via full genome sequencing analyses, they identify recombinant haplotypes in the spike, nucleocapsid, and ORF 8 coding regions, suggesting recombination could play a role in SARS-CoV-2 genetic diversity.

    • Joel O. Wertheim
    • Jade C. Wang
    • Scott Hughes
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-11

  • West and colleagues develop the Variant Database software tool for examination of changing Spike mutations in SARS-CoV-2 genomes. The authors use this to detect emerging lineages of SARS-CoV-2 in New York and report the rapid spread of the B.1.526 lineage in the city.

    • Anthony P. West Jr.
    • Joel O. Wertheim
    • Pamela J. Bjorkman
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-10