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Showing 1–50 of 770 results
Advanced filters: Author: Su See Lee Clear advanced filters
  • Thermal lepton pairs are ideal probes for the temperature of quark-gluon plasma. Here, the STAR Collaboration uses thermal electron-positron pair production to measure quark-gluon plasma average temperature at different stages of the evolution.

    • B. E. Aboona
    • J. Adam
    • M. Zyzak
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Anti-cancer drugs could independently promote TB progression. Here, the authors show using mouse models, that anti-cancer drug treatments could induce delayed Mtb-specific T cell responses, followed by G-CSF dependent neutrophil manifestation in the lungs, leading to TB exacerbation.

    • Kee Woong Kwon
    • Tae Gun Kang
    • Sang-Jun Ha
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-20
  • The stability of polymer electrolyte membrane fuel cells is limited by the degradation of the cathode catalyst during repetitive start-up/shut-down events — a parasitic oxygen reduction reaction on the anode causes an instantaneous potential jump at the cathode. The issue is now addressed by selectively suppressing the oxygen reduction reaction on the anode by exploiting the metal–insulator transition behaviour of Pt/HxWO3 catalysts.

    • Sang-Mun Jung
    • Su-Won Yun
    • Yong-Tae Kim
    Research
    Nature Catalysis
    Volume: 3, P: 639-648
  • The neural circuits that transmit cool signals remain not fully understood. Here, authors identify a spinal circuit in mice that transmits cool sensations from the skin to the brain, revealing a dedicated neural pathway for detecting innocuous cool temperatures.

    • Hankyu Lee
    • Chia Chun Hor
    • Bo Duan
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-18
  • Integrative analyses of transcriptome and whole-genome sequencing data for 1,188 tumours across 27 types of cancer are used to provide a comprehensive catalogue of RNA-level alterations in cancer.

    • Claudia Calabrese
    • Natalie R. Davidson
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 129-136
  • CAR T cell manufacturing faces significant challenges that impact cell quality and in vivo efficacy. This necessitates reliable cellular characterization methods. Here the authors present a real-time, label-free, microfluidic method that profiles cellular biophysical properties and correlates them to activation state and CAR T potency, facilitating the rapid phenotypic cell assessment during production.

    • Kerwin Kwek Zeming
    • Kai Yun Quek
    • Jongyoon Han
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • The insertion of thin layers of cobalt can stabilize β-tungsten under back-end-of-line thermal constraints, allowing a 64-kb spin–orbit torque magnetic random-access memory to be fabricated that offers a spin–orbit torque switching of 1 ns, data retention of more than 10 years and a tunnelling magnetoresistance of 146%.

    • Yen-Lin Huang
    • MingYuan Song
    • Xinyu Bao
    Research
    Nature Electronics
    Volume: 8, P: 794-802
  • Here the authors demonstrate functionality for on-chip optical communications via reconfigurable exciton-plasmon interconversion in 200 nm-diameter silver nanowires overlapping onto two-dimensional transition metal dichalcogenide transistors.

    • Hyun Seok Lee
    • Dinh Hoa Luong
    • Young Hee Lee
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-6
  • A geological, petrographic and geochemical survey of distinctive mudstone and conglomerate outcrops of the Bright Angel formation on Mars reveals textures, chemical and mineral characteristics, and organic signatures that warrant consideration as potential biosignatures.

    • Joel A. Hurowitz
    • M. M. Tice
    • Z. U. Wolf
    ResearchOpen Access
    Nature
    Volume: 645, P: 332-340
  • The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

    • Marek Cmero
    • Ke Yuan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • Cancers evolve as they progress under differing selective pressures. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, the authors present the method TrackSig the estimates evolutionary trajectories of somatic mutational processes from single bulk tumour data.

    • Yulia Rubanova
    • Ruian Shi
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • In this study the authors consider the structural variants (SVs) present within cancer cases of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium. They report hundreds of genes, including known cancer-associated genes for which the nearby presence of a SV breakpoint is associated with altered expression.

    • Yiqun Zhang
    • Fengju Chen
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-14
  • With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

    • Matthew H. Bailey
    • William U. Meyerson
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-27
  • Viral pathogen load in cancer genomes is estimated through analysis of sequencing data from 2,656 tumors across 35 cancer types using multiple pathogen-detection pipelines, identifying viruses in 382 genomic and 68 transcriptome datasets.

    • Marc Zapatka
    • Ivan Borozan
    • Christian von Mering
    ResearchOpen Access
    Nature Genetics
    Volume: 52, P: 320-330
  • Drop impact on a liquid surface leads to the formation of vortex rings, but this process is still poorly understood due to the lack of effective experimental characterization. Here, Leeet al. visualize the process using ultrafast X-ray phase-contrast imaging and follow the dynamics of vortex rings.

    • Ji San Lee
    • Su Ji Park
    • Jung Ho Je
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-8
  • Glycogenin initiates glycogen synthesis, but its two human isoforms may do more than expected. Here, Weng et al. reveal that GYG2, despite low enzyme activity, drives glycogen particle assembly, uncovering a new layer of metabolic control.

    • Tzu-Han Weng
    • Yu-Chung Pien
    • Su-Yi Tsai
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-21
  • Some cancer patients first present with metastases where the location of the primary is unidentified; these are difficult to treat. In this study, using machine learning, the authors develop a method to determine the tissue of origin of a cancer based on whole sequencing data.

    • Wei Jiao
    • Gurnit Atwal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Although synthesis of high-quality MoS2 has been demonstrated, growth of monolayer MoS2at controlled locations is highly desirable for applications. Here, the authors introduce a method where patterned seeds of molybdenum source material are used to grow isolated flakes at predetermined locations.

    • Gang Hee Han
    • Nicholas J. Kybert
    • A. T. Charlie Johnson
    Research
    Nature Communications
    Volume: 6, P: 1-6
  • Understanding deregulation of biological pathways in cancer can provide insight into disease etiology and potential therapies. Here, as part of the PanCancer Analysis of Whole Genomes (PCAWG) consortium, the authors present pathway and network analysis of 2583 whole cancer genomes from 27 tumour types.

    • Matthew A. Reyna
    • David Haan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • Whole-genome sequencing data for 2,778 cancer samples from 2,658 unique donors across 38 cancer types is used to reconstruct the evolutionary history of cancer, revealing that driver mutations can precede diagnosis by several years to decades.

    • Moritz Gerstung
    • Clemency Jolly
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 122-128
  • A bubble at an air–liquid interface can form a liquid jet upon bursting, spraying aerosol droplets into the air. Leeet al. show that jetting is analogous to pinching-off in liquid coalescence, which may be useful in applications that prevent jet formation and in the improved incorporation of aerosols in climate models.

    • Ji San Lee
    • Byung Mook Weon
    • Wah-Keat Lee
    ResearchOpen Access
    Nature Communications
    Volume: 2, P: 1-7
  • Light trapped in the active polymeric layer limits the total efficiency of polymer light-emitting diodes. Here, Lee et al.get round this bottleneck by enhancing light extraction in waveguide optical modes via ripple-shaped nanostructures that spontaneously form on ZnO electrode surfaces.

    • Bo Ram Lee
    • Eui Dae Jung
    • Myoung Hoon Song
    Research
    Nature Communications
    Volume: 5, P: 1-8
  • Interactions between alveolar epithelial cells and macrophages shape lung development and function. Here Kang et al. develop alveolar assembloids by co-culturing alveolar organoids with macrophages providing a platform to model lung diseases.

    • Ji Su Kang
    • Youngsun Lee
    • Mi-Ok Lee
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • While the organelle genome is commonly considered to be a single circular DNA molecule, extensive variation exists. Here, the authors report multipartite minicircular genomes in red algae and indicate an origin driven by recombination due to loss of DNA replication, recombination, and repair genes.

    • Yongsung Lee
    • Chung Hyun Cho
    • Hwan Su Yoon
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-16
  • Exome sequencing of 851 trios from more than 2,500 individuals finds 187 genes with de novo mutations that contribute to meningomyelocele (spina bifida) and highlights critical pathways required for neural tube closure.

    • Yoo-Jin Jiny Ha
    • Ashna Nisal
    • Joseph G. Gleeson
    Research
    Nature
    Volume: 641, P: 419-426
  • There’s an emerging body of evidence to show how biological sex impacts cancer incidence, treatment and underlying biology. Here, using a large pan-cancer dataset, the authors further highlight how sex differences shape the cancer genome.

    • Constance H. Li
    • Stephenie D. Prokopec
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-24
  • Oxide ceramic electrolytes for Li-metal batteries often require high-temperature processing, which can compromise material reliability. Here, the authors present a sintering-free approach to synthesize disorder-driven garnet-type solid electrolytes, achieving performance comparable to traditional sintered materials.

    • Giyun Kwon
    • Hyeokjo Gwon
    • Yong Su Kim
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Photolithography is an established microfabrication technique but commonly uses costly shortwavelength light sources to achieve high resolution. Here the authors use metal patterns embedded in a flexible elastomer photomask with mechanical robustness for generation of subdiffraction patterns as a cost effective near-field optical printing approach.

    • Sangyoon Paik
    • Gwangmook Kim
    • Wooyoung Shim
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • The characterization of 4,645 whole-genome and 19,184 exome sequences, covering most types of cancer, identifies 81 single-base substitution, doublet-base substitution and small-insertion-and-deletion mutational signatures, providing a systematic overview of the mutational processes that contribute to cancer development.

    • Ludmil B. Alexandrov
    • Jaegil Kim
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 94-101
  • Analyses of 2,658 whole genomes across 38 types of cancer identify the contribution of non-coding point mutations and structural variants to driving cancer.

    • Esther Rheinbay
    • Morten Muhlig Nielsen
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 102-111
  • Whole-genome sequencing data from more than 2,500 cancers of 38 tumour types reveal 16 signatures that can be used to classify somatic structural variants, highlighting the diversity of genomic rearrangements in cancer.

    • Yilong Li
    • Nicola D. Roberts
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 112-121
  • Many tumours exhibit hypoxia (low oxygen) and hypoxic tumours often respond poorly to therapy. Here, the authors quantify hypoxia in 1188 tumours from 27 cancer types, showing elevated hypoxia links to increased mutational load, directing evolutionary trajectories.

    • Vinayak Bhandari
    • Constance H. Li
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • Determining whether somatosensory neurons are involved in internal or external sensing remains a challenge. Here, the authors show that analyzing connectivity is a powerful approach to identify putative neural functions of somatosensory neurons in the fly.

    • Su-Yee J. Lee
    • Chris J. Dallmann
    • Sweta Agrawal
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Acquiring subcellular-level three-dimensional (3D) tissue structures efficiently without damaging the tissue remains challenging in histopathology. Here, the authors integrate holotomography with deep learning to generate 3D virtual H&E staining images from label-free thick cancer tissues, and apply this approach to colon and gastric cancer samples.

    • Juyeon Park
    • Su-Jin Shin
    • YongKeun Park
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Mapping enhancer-target gene pairs with single-cell multimodal data is challenged by the data’s unique characteristics and computational demands. Here, the authors propose scMultiMap, a statistical method with high statistical power and computational efficiency for inferring their associations.

    • Chang Su
    • Dongsoo Lee
    • Jingfei Zhang
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Immunotherapy has yet to demonstrate efficacy for patients with glioblastoma. Here, the authors employ human single-cell RNA-seq, spatial transcriptomics, and a preclinical mouse model to show that glioblastoma cell-derived synaptogenic factor Thrombospondin-1 promotes neuronal circuit remodeling and regional immunosuppression, highlighting a potential therapeutic target.

    • Takahide Nejo
    • Saritha Krishna
    • Hideho Okada
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-19
  • The mechanical testing of thin films is non-trivial, due to their very fine dimensions. Kim et al. use the inherent surface tension of water as a platform for the frictionless tensile testing of gold films, with a thickness as fine as 55 nm.

    • Jae-Han Kim
    • Adeel Nizami
    • Taek-Soo Kim
    Research
    Nature Communications
    Volume: 4, P: 1-6
  • Fabrication of complex two-dimensional patterns is now possible using ‘rails’ as a guiding mechanism for the self-assembly of microstructures within fluidic channels. The method is efficient, and heterogeneous systems, for example patterns of different living cells for tissue engineering, can be made with high precision.

    • Su Eun Chung
    • Wook Park
    • Sunghoon Kwon
    Research
    Nature Materials
    Volume: 7, P: 581-587
  • Traditional non-volatile memories suffer from poor scalability in the vertical direction due to the use of a bulky oxide layer. Here, the authors develop a tunnelling random access memory using a vertical heterostructure composed of atomically thin molybdenum disulfide, boron nitride and graphene.

    • Quoc An Vu
    • Yong Seon Shin
    • Woo Jong Yu
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-8