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Showing 51–100 of 1127 results
Advanced filters: Author: Thomas G. Sim Clear advanced filters
  • Peroxisomes contain detergent resistant core structures. Bäcker et al. show that these core structures contain diverse enzymes and serve to enable metabolic compartmentalization of the peroxisome lumen.

    • Nils Bäcker
    • Julia Ast
    • Johannes Freitag
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Bayesian Flow Networks generate diverse, novel, and coherent protein sequences, surpassing prior unconditional generation methods. They also permit flexible conditional generation during inference, which is demonstrated on antibody inpainting tasks.

    • Timothy Atkinson
    • Thomas D. Barrett
    • Alexandre Laterre
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14
  • The ultrafast optical control of resonances in temporally symmetry-broken metasurfaces allows resonances to be created, annihilated or programmably manipulated, which is useful for applications that require active real-time tunability.

    • Andreas Aigner
    • Thomas Possmayer
    • Andreas Tittl
    ResearchOpen Access
    Nature
    Volume: 644, P: 896-902
  • How can the brain improve memory for an experience after it has occurred? Halpern et al. use intracranial EEG to show that, even while processing current experiences, people reactivate old ones and re-encode them, turning thoughts into memories.

    • David J. Halpern
    • Bradley C. Lega
    • Michael J. Kahana
    Research
    Nature Neuroscience
    Volume: 28, P: 883-890
  • It is known that exercise influences many human traits, but not which tissues and genes are most important. This study connects transcriptome data collected across 15 tissues during exercise training in rats as part of the Molecular Transducers of Physical Activity Consortium with human data to identify traits with similar tissue specific gene expression signatures to exercise.

    • Nikolai G. Vetr
    • Nicole R. Gay
    • Stephen B. Montgomery
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-14
  • Glucocorticoids are associated with stress. Here, the authors show that high levels of glucocorticoid stress promote secretory autophagy of matrix metalloproteinase 9 via a stress responsive chaperone, increasing brain-derived neurotrophic factor processing and potentially altering adult synaptic plasticity.

    • Silvia Martinelli
    • Elmira A. Anderzhanova
    • Nils C. Gassen
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-17
  • VEGF-A/VEGFR2 signaling is a key driver of endothelial cell migration during sprouting angiogenesis. Here Genet et al. show that endophilin A2 regulates these processes by mediating clathrin-independent VEGFR2 internalization.

    • Gael Genet
    • Kevin Boyé
    • Anne Eichmann
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-15
  • Protein biosynthesis is a major target of existing antibiotics that inhibit the efficiency or fidelity of the bacterial ribosome. Here, the authors show that a synthetic peptide displays bactericidal activity through a different mechanism, inducing co-translational aggregation of nascent peptidic chains.

    • Laleh Khodaparast
    • Ladan Khodaparast
    • Frederic Rousseau
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-18
  • Heterochromatin factor KAP-1 is phosphorylated by ATM during the DNA damage response. Now the functional consequences of this modification are explored, revealing that the phosphorylated C-terminal region of KAP-1 perturbs the interaction between auto-SUMOylated KAP-1 and CHD3/Mi-2a, a component of the chromatin remodeler NuRD. This results in CHD3 dispersion from heterochromatin and allows DNA repair to proceed.

    • Aaron A Goodarzi
    • Thomas Kurka
    • Penelope A Jeggo
    Research
    Nature Structural & Molecular Biology
    Volume: 18, P: 831-839
  • Miniaturizing electromagnetic coils enhances magnetic field generation for micro-sensor applications but requires effective heat dissipation to manage Joule heating. Here, through innovative radial heat flux design, the authors present microcoils achieving static fields over 600 mT and field gradients exceeding 106 Tm−1 at room temperature, enabling applications in magnetic sensors such as switchable magnetic force microscopy probes.

    • Aniruddha Sathyadharma Prasad
    • Rachappa Ravishankar
    • Thomas Mühl
    ResearchOpen Access
    Communications Materials
    Volume: 6, P: 1-9
  • High numbers of COVID-19-related deaths have been reported in the United States, but estimation of the true numbers of infections is challenging. Here, the authors estimate that on 1 June 2020, 3.7% of the US population was infected with SARS-CoV-2, and 0.01% was infectious, with wide variation by state.

    • H. Juliette T. Unwin
    • Swapnil Mishra
    • Seth Flaxman
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-9
  • Alzheimer’s disease is heterogeneous in its neuroimaging and clinical phenotypes. Here the authors present a semi-supervised deep learning method, Smile-GAN, to show four neurodegenerative patterns and two progression pathways providing prognostic and clinical information.

    • Zhijian Yang
    • Ilya M. Nasrallah
    • Balebail Ashok Raj
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-15
  • Organelle-specific protein translocation systems are essential for organelle biogenesis and maintenance in eukaryotes. Here, Paulus et al. show that homologous proteins also play a role in the formation and function of bacterial magnetosome organelles.

    • Anja Paulus
    • Frederik Ahrens
    • René Uebe
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-16
  • Eyewitness errors contribute to wrongful convictions. Here, the authors present a lineup procedure that reveals the structure of eyewitness memory, reduces decision bias, and measures performance of individual witnesses.

    • Sergei Gepshtein
    • Yurong Wang
    • Thomas D. Albright
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • Imaging of lipid bilayers using light microscopy is challenging. Here the authors label cells using a short chain click-compatible ceramide to visualize mammalian and bacterial membranes with expansion microscopy.

    • Ralph Götz
    • Tobias C. Kunz
    • Markus Sauer
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-9
  • Via spin-exchange interactions with 51V5+ ions, an optically addressed 171Yb3+ qubit in a nuclear-spin-rich yttrium orthovanadate crystal is used to implement a reproducible nuclear-spin-based quantum memory, and entangled Yb–V Bell states are demonstrated.

    • Andrei Ruskuc
    • Chun-Ju Wu
    • Andrei Faraon
    Research
    Nature
    Volume: 602, P: 408-413
  • Patients with neurodevelopmental conditions without a monogenic diagnosis have a higher polygenic burden than those with a monogenic diagnosis. Non-transmitted common alleles in the parents are associated with the child’s phenotype, and the common and rare variants conferring risk are correlated.

    • Qin Qin Huang
    • Emilie M. Wigdor
    • Hilary C. Martin
    ResearchOpen Access
    Nature
    Volume: 636, P: 404-411
  • Alternative stable states in forests have implications for the biosphere. Here, the authors combine forest biodiversity observations and simulations revealing that leaf types across temperate regions of the NH follow a bimodal distribution suggesting signatures of alternative forest states.

    • Yibiao Zou
    • Constantin M. Zohner
    • Thomas W. Crowther
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-15
  • Actin cables affect lifespan by supporting movement and inheritance of fitter mitochondria to daughter cells in yeast. Here the authors show that branched-chain amino acid (BCAA) levels affect actin cable stability and a role for YKL075C/AAN1 in control of BCAA metabolism and actin cable stability and function.

    • Cierra N. Sing
    • Enrique J. Garcia
    • Liza A. Pon
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-12
  • Large pulses of disturbance have been observed globally in response to climate change. Using Taylor’s Law, the authors show that those pulses were not unpredictable but expected given a strong scaling between mean disturbance rates and variability of disturbances rates through time.

    • Cornelius Senf
    • Rupert Seidl
    • Tommaso Jucker
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-7
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Current digital hardware struggles with high computational demands in applications such as probabilistic AI. Here, authors present a small-scale thermodynamic computer composed of eight RLC circuits, demonstrating Gaussian sampling and matrix inversion, suggesting potential speed and energy efficiency advantages over digital GPUs.

    • Denis Melanson
    • Mohammad Abu Khater
    • Patrick J. Coles
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-9
  • Microporous hydrogels have potential in 3D tissue culture, but precise control over pore formation is challenging. Here, the authors report the use of photopolymerization-induced phase separation to prepare hydrogels suitable for 3D cell culture and bioprinting.

    • Monica Z. Müller
    • Margherita Bernero
    • Xiao-Hua Qin
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-13
  • Measurements of the proton’s electromagnetic structure show enhancement of its electric generalized polarizability compared with theoretical expectations, confirming the presence of a new dynamical mechanism not accounted for by current theories.

    • R. Li
    • N. Sparveris
    • J. Zhou
    Research
    Nature
    Volume: 611, P: 265-270
  • The role of cohesin in organizing a functional nuclear architecture remains poorly understood. Here the authors show that cohesin depleted cells pass through endomitosis forming a multilobulated nucleus able to proceed through S-phase with typical features of active and inactive nuclear compartments and spatio-temporal patterns of replication domains.

    • Marion Cremer
    • Katharina Brandstetter
    • Thomas Cremer
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • Analytical gaps limit the utility of scATAC-seq for studying gene regulatory programs in human disease. Here, authors describe MOCHA, a robust analytical tool with advanced statistical modelling that enables functional genomic inference in large cross-sectional and longitudinal human studies.

    • Samir Rachid Zaim
    • Mark-Phillip Pebworth
    • Xiao-jun Li
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-24
  • FinFETs are an evolution of metal-oxide-semiconductor field effect transistors (MOSFETs) featuring a semiconducting channel vertically wrapped by conformal gate electrodes. Here, the authors use a two-dimensional semiconductor to push the FinFET width to sub-nm whilst achieving a 107 ON/OFF ratio.

    • Mao-Lin Chen
    • Xingdan Sun
    • Zheng Han
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-7
  • The affected cellular populations during Alzheimer’s disease progression remain understudied. Here the authors use a cohort of 84 donors, quantitative neuropathology and multimodal datasets from the BRAIN Initiative. Their pseudoprogression analysis revealed two disease phases.

    • Mariano I. Gabitto
    • Kyle J. Travaglini
    • Ed S. Lein
    ResearchOpen Access
    Nature Neuroscience
    Volume: 27, P: 2366-2383
  • The authors measure numerous ecosystem functions across an elevational gradient on Mt Kilimanjaro and find that species richness impacts function more than species turnover across sites. They also show that variation in species richness impacts ecosystem functioning more strongly at the landscape scale than at the local scale.

    • Jörg Albrecht
    • Marcell K. Peters
    • Matthias Schleuning
    Research
    Nature Ecology & Evolution
    Volume: 5, P: 1582-1593
  • Enzymes with identical sequences of amino acids can display varying activities when encoded with mRNA with different properties, but why this is the case has been a mystery. Now, it has been shown that synonymous mutations in mRNA alter the partitioning of proteins into long-lived soluble misfolded states with varying activities.

    • Yang Jiang
    • Syam Sundar Neti
    • Edward P. O’Brien
    Research
    Nature Chemistry
    Volume: 15, P: 308-318
  • Prostate cancer (PrCa) involves a large heritable genetic component. Here, the authors perform multivariate fine-mapping of known PrCa GWAS loci, identifying variants enriched for biological function, explaining more familial relative risk, and with potential application in clinical risk profiling.

    • Tokhir Dadaev
    • Edward J. Saunders
    • Zsofia Kote-Jarai
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-19
  • RNA splicing variations could help identify cancer subtypes, but this task is computationally challenging. Here, the authors develop CHESSBOARD, a Bayesian tile finding algorithm for splicing data which identifies patterns in the form of tiles and can discover leukemia subgroups associated with therapeutic response.

    • David Wang
    • Mathieu Quesnel-Vallieres
    • Yoseph Barash
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-15
  • Geospatial estimates of the prevalence of anemia in women of reproductive age across 82 low-income and middle-income countries reveals considerable heterogeneity and inequality at national and subnational levels, with few countries on track to meet the WHO Global Nutrition Targets by 2030.

    • Damaris Kinyoki
    • Aaron E. Osgood-Zimmerman
    • Simon I. Hay
    ResearchOpen Access
    Nature Medicine
    Volume: 27, P: 1761-1782
  • Fishing has had a profound impact on global reef shark populations, and the absence or presence of sharks is strongly correlated with national socio-economic conditions and reef governance.

    • M. Aaron MacNeil
    • Demian D. Chapman
    • Joshua E. Cinner
    Research
    Nature
    Volume: 583, P: 801-806