Abstract
Monozygotic twin brothers with a subtelomeric 6q deletion presented with mental retardation, microcephaly, seizures, an enlarged cisterna magna, dimpling at elbows, a high arched palate and a thin upper lip. The same subtelomeric deletion was detected in the mother of the patients, presenting with a milder phenotype. We narrowed down the breakpoint to a region of approximately 100 kb and estimated the size of the terminal deletion to be 1.2 Mb. This region contains four known and seven putative genes. Comparison of the deletion with other reported patients showed TBP was the most plausible candidate gene for the mental retardation in this syndrome. We verified that the TBP gene expression was halved in our patients using real-time PCR. Cognitive and behavioural tests performed on previously described heterozygous tbp mice suggested that TBP is potentially involved in cognitive development.
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References
de Vries BBA, Winter R, Schinzel A, van Ravenswaaij-Arts C : Telomeres: a diagnosis at the end of the chromosomes. J Med Genet 2003; 40: 385–398.
Flint J, Knight S : The use of telomere probes to investigate submicroscopic rearrangements associated with mental retardation. Curr Opin Genet Dev 2003; 13: 310–316.
Rooms L, Reyniers E, Kooy RF : Subtelomeric rearrangements in the mentally retarded: a comparison of detection methods. Hum Mutat 2005; 25: 513–524.
van Bever Y, Rooms L, Laridon A et al: Clinical report of a pure subtelomeric 1qter deletion in a boy with mental retardation and multiple anomalies adds further evidence for a specific phenotype. Am J Med Genet 2005; 135A: 91–95.
Heilstedt HA, Ballif BC, Howard LA et al: Physical map of 1p36, placement of breakpoints in monosomy 1p36, and clinical characterization of the syndrome. Am J Hum Genet 2003; 72: 1200–1212.
Stewart DR, Huang A, Faravelli F et al: Subtelomeric deletions of chromosome 9q: a novel microdeletion syndrome. Am J Med Genet A 2004; 128: 340–351.
Kleefstra T, Smidt M, Banning MJG et al: Disruption of the gene euchromatin histone methyl transferase1 (Eu-HMTase1) is associated with the 9q34 subtelomeric deletion syndrome. J Med Genet 2005; 42: 299–306.
Eash D, Waggoner D, Chung J, Stevenson D, Martin CL : Calibration of 6q subtelomere deletions to define genotype/phenotype correlations. Clin Genet 2005; 67: 396–403.
Stevenson DA, Brothman AR, Carey JC et al: 6q Subtelomeric deletion: is there a recognizable syndrome? Clin Dysmorphol 2004; 13: 103–106.
Rooms L, Reyniers E, Wuyts W et al: Multiplex ligation-dependent probe amplification to detect subtelomeric rearrangements in routine diagnostics. Clin Genet 2006; 69: 58–64.
Vandesompele J, De Preter K, Pattyn F et al: Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 2002; 3: 34.1–34.11.
D'Hooge R, Lullmann-Rauch R, Beckers T et al: Neurocognitive and psychotiform behavioral alterations and enhanced hippocampal long-term potentiation in transgenic mice displaying neuropathological features of human alpha-mannosidosis. J Neurosci 2005; 25: 6539–6549.
File SE, Seth P : A review of 25 years of the social interaction test. Eur J Pharmacol 2003; 463: 35–53.
Kraus J, Lederer G, Keri C et al: A familial unbalanced subtelomeric translocation resulting in monosomy 6q27-->qter. J Med Genet 2003; 40: e48.
Koide R, Kobayashi S, Shimohata T et al: A neurological disease caused by an expanded CAG trinucleotide repeat in the TATA-binding protein gene: a new polyglutamine disease? Hum Mol Genet 1999; 8: 2047–2053.
Wu YR, Lin HY, Chen CM et al: Genetic testing in spinocerebellar ataxia in Taiwan: expansions of trinucleotide repeats in SCA8 and SCA17 are associated with typical Parkinson's disease. Clin Genet 2004; 65: 209–214.
Stevanin G, Fujigasaki H, Lebre AS et al: Huntington's disease-like phenotype due to trinucleotide repeat expansions in the TBP and JPH3 genes. Brain 2003; 126: 1599–1603.
van Roon-Mom WM, Reid SJ, Faull RL, Snell RG : TATA-binding protein in neurodegenerative disease. Neuroscience 2005; 133: 863–872.
Birnbacher R, Chudoba I, Pirc-Danoewinata H et al: Microdissection and reverse painting reveals a microdeletion 6(q26qter) in a de novo r(6) chromosome. Ann Genet 2001; 44: 13–18.
Hong EJ, West AE, Greenberg ME : Transcriptional control of cognitive development. Curr Opin Neurobiol 2005; 15: 21–28.
Martianov I, Viville S, Davidson I : RNA polymerase II transcription in murine cells lacking the TATA binding protein. Science 2002; 298: 1036–1039.
Spencer CM, Alekseyenko O, Serysheva E : Altered anxiety-related and social behaviors in the Fmr1 knockout mouse model of fragile X syndrome. Genes Brain Behav 2005; 4: 420–430.
Acknowledgements
Work on the detection of subtelomeric rearrangements in Antwerp was supported by grants from the Marguerite-Marie Delacroix foundation and the Belgian National Fund for Scientific Research–Flanders (FWO). This research was performed in the framework of the Interuniversity Attraction Poles program P5/19 of the Belgian Federal Science Policy Office.
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Rooms, L., Reyniers, E., Scheers, S. et al. TBP as a candidate gene for mental retardation in patients with subtelomeric 6q deletions. Eur J Hum Genet 14, 1090–1096 (2006). https://doi.org/10.1038/sj.ejhg.5201674
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DOI: https://doi.org/10.1038/sj.ejhg.5201674
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