Table 1 Markers and recombination frequency estimates used in the comparison between the intraspecific mapping population of adult male N. vitripennis and the interspecific mapping population of N. giraulti (♂) × N. vitripennis (♀) F2 hybrid embryos (see Figure 2)
Chromosome | Adjacent microsatellite marker pair of intraspecific N. vitripennis map | Recombination rate estimate in N. vitripennis adults (cM) | Corresponding adjacent scaffold positions in N. vitripennis genome | Recombination rate estimate in N. vitripennis- N. giraulti embryos (cM) |
|---|---|---|---|---|
1 | Nv180-Nv181 | 0.145 | NVG_SCAFFOLD16_1815958-NVG_SCAFFOLD16_3425262 | 0.143 |
1 | Nv181-Nv126a | 0.197 | NVG_SCAFFOLD16_3425262-NVG_SCAFFOLD41_300676 | 0.181 |
1 | Nv126-Nv156a | 0.000 | NVG_SCAFFOLD41_300676-NVG_SCAFFOLD73_410408 | 0.000 |
1 | Nv156-Nv170a | 0.000 | NVG_SCAFFOLD73_410408-NVG_SCAFFOLD170_1506160 | 0.008 |
1 | Nv170-Nv191a | 0.045 | NVG_SCAFFOLD170_1506160-NVG_SCAFFOLD33_767863 | 0.000 |
1 | Nv191-Nv169a | 0.000 | NVG_SCAFFOLD33_767863-NVG_SCAFFOLD25_803967 | 0.000 |
1 | Nv169-Nv105a | 0.136 | NVG_SCAFFOLD25_803967-NVG_SCAFFOLD1_2289896 | 0.039 |
1 | Nv105-Nv127a | 0.221 | NVG_SCAFFOLD1_2289896-NVG_SCAFFOLD60_741110 | 0.136 |
2 | Nv193-Nv20 | 0.352 | NVG_SCAFFOLD8_907155-NVG_SCAFFOLD31_231950 | 0.274 |
2 | Nv20-Nv168b | 0.063 | NVG_SCAFFOLD31_231950-NVG_SCAFFOLD15_2695394 | 0.159 |
2 | Nv168-Nv123 | 0.027 | NVG_SCAFFOLD15_2695394-NVG_SCAFFOLD13_2593414 | 0.023 |
2 | Nv123-Nv132 | 0.012 | NVG_SCAFFOLD13_2593414-NVG_SCAFFOLD19_473227 | 0.012 |
2 | Nv132-Nv133 | 0.071 | NVG_SCAFFOLD19_473227-NVG_SCAFFOLD19_2929250 | 0.063 |
2 | Nv133-Nv186 | 0.211 | NVG_SCAFFOLD19_2929250-NVG_SCAFFOLD24_1685756 | 0.199 |
2 | Nv186-Nv190 | 0.214 | NVG_SCAFFOLD24_1685756-NVG_SCAFFOLD309_48837 | 0.213 |
3 | Nv319-Nv192 | 0.264 | NVG_SCAFFOLD18_2635495-NVG_SCAFFOLD6_1855275 | 0.271 |
3 | Nv192-Nv189 | 0.054 | NVG_SCAFFOLD6_1855275-NVG_SCAFFOLD44_4553601 | 0.071 |
3 | Nv189-Nv184 | 0.072 | NVG_SCAFFOLD44_4553601-NVG_SCAFFOLD22_1311250 | 0.056 |
3 | Nv184-Nv111 | 0.151 | NVG_SCAFFOLD22_1311250-NVG_SCAFFOLD17_1342149 | 0.099 |
3 | Nv111-Nv108 | 0.175 | NVG_SCAFFOLD17_1342149-NVG_SCAFFOLD28_187258 | 0.177 |
3 | Nv108-Nv107 | 0.139 | NVG_SCAFFOLD28_187258-NVG_SCAFFOLD28_1356359 | 0.141 |
4 | Nv26-Nv141 | 0.378 | NVG_SCAFFOLD4_2791862-NVG_SCAFFOLD29_1439582 | 0.285 |
4 | Nv141-Nv114b | 0.027 | NVG_SCAFFOLD29_1439582-NVG_SCAFFOLD23_1489254 | 0.054 |
4 | Nv114-Nv147b | 0.027 | NVG_SCAFFOLD23_1489254-NVG_SCAFFOLD34_1272544 | 0.008 |
4 | Nv147-Nv136a | 0.018 | NVG_SCAFFOLD34_1272544-NVG_SCAFFOLD26_7306 | 0.011 |
4 | Nv136-Nv137a | 0.004 | NVG_SCAFFOLD26_7306-NVG_SCAFFOLD26_1516282 | 0.004 |
4 | Nv137-Nv182 | 0.090 | NVG_SCAFFOLD26_1516282-NVG_SCAFFOLD123_174844 | 0.065 |
4 | Nv182-Nv154 | 0.202 | NVG_SCAFFOLD123_174844-NVG_SCAFFOLD9_3107879 | 0.162 |
4 | Nv154-Nv104 | 0.329 | NVG_SCAFFOLD9_3107879-NVG_SCAFFOLD9_635808 | 0.318 |
- | ||||
5 | Nv124-Nv179 | 0.291 | NVG_SCAFFOLD14_227534-NVG_SCAFFOLD14_3478710 | 0.287 |
5 | Nv179-Nv152 | 0.105 | NVG_SCAFFOLD14_3478710-NVG_SCAFFOLD38_42794 | 0.038 |
5 | Nv152-Nv176 | 0.185 | NVG_SCAFFOLD38_42794-NVG_SCAFFOLD1_6038985 | 0.127 |
5 | Nv176-Nv109 | 0.008 | NVG_SCAFFOLD1_6038985-NVG_SCAFFOLD1_7302524 | 0.007 |