Table 1 Global estimates of genetic diversity and population substructure within temporally separated samples

From: Patterns of cyto-nuclear linkage disequilibrium in Silene latifolia: genomic heterogeneity and temporal stability

Locus

1993

2008

 

M

N

P

H O

H E

F IT

LD

N

P

H O

H E

F IT

LD

SL_eSSR04

3

8

0.43

0.58

0.74

0.244***

7

8

0.55

0.57

0.65

0.143***

7

SL_eSSR06

3

15

0.32

0.50

0.82

0.405***

9

17

0.22

0.71

0.84

0.178***

10

SL_eSSR09

3

8

0.74

0.32

0.44

0.282***

8

8

0.75

0.39

0.43

0.101*

7

SL_eSSR12

2

12

0.22

0.72

0.87

0.185***

10

13

0.39

0.69

0.80

0.142***

11

SL_eSSR16

3

9

0.54

0.40

0.63

0.401***

10

6

0.54

0.48

0.62

0.245***

9

SL_eSSR20

3

5

0.94

0.12

0.11

–0.041

1

5

0.96

0.07

0.08

0.140*

1

SL_eSSR29

3

17

0.19

0.74

0.89

0.180***

11

22

0.22

0.84

0.90

0.078***

8

SL_eSSR30

3

17

0.43

0.69

0.77

0.111**

9

18

0.36

0.43

0.81

0.489***

11

slat_18

3

9

0.36

0.39

0.76

0.498***

10

11

0.43

0.37

0.76

0.519***

7

slat_32

4

7

0.34

0.44

0.78

0.455***

11

8

0.30

0.32

0.78

0.608***

11

slat_33

3

3

0.55

0.13

0.50

0.780***

12

2

0.65

0.11

0.46

0.792***

13

slat_48

3

5

0.45

0.27

0.66

0.597***

3

6

0.69

0.17

0.46

0.662***

7

slat_72

3

11

0.46

0.48

0.74

0.359***

9

13

0.19

0.38

0.80

0.582***

12

slat_85

3

17

0.44

0.54

0.76

0.303***

12

10

0.58

0.29

0.60

0.528***

8

Overall

—

10.21

0.46

0.45

0.68

0.353***

8.71

10.5

0.49

0.42

0.64

0.377***

8.71

  1. M=repeat size of the marker; N=number of observed alleles; P=allele frequency of the most frequent allele.
  2. HO and HE are observed and expected heterozygosity, respectively, of each sampled microsatellite locus; FIT is the correlation of alleles within individuals relative to the metapopulation as a whole, and can be interpreted as an approximate measure of deviation from panmixia. Statistical deviations from panmixia are indicated by the symbols *P<0.05, **P<0.01 and ***P<0.001) and LD is an indication of the number of other nuclear loci for which each focal nuclear locus exhibits a non-random association, based upon an approximation of Fisher’s exact test of random association and a P⩽0.05.
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