Figure 1
From: Identification of novel exonic mobile element insertions in epithelial ovarian cancers
A representative novel exonic mobile element insertion (MEI). (a) Screenshot of IGV. Nine split reads (partially mapped to the reference genome and partially to a mobile element) were mapped on exon4 of OTUD7B. Track 1 shows mapped reads from tumors. Track 2 shows split reads from tumors extracted by Mobster. Track 3 shows mapped reads from matched normal tissue. Track 4 shows that no split reads were extracted from matched normal tissue by Mobster. The red arrow indicates the insertion point. (b) Alignment of the nine split reads. Asterisks in the BWA lane show nucleotides mapped to the reference genome (hg19). Asterisks in the MEI lane show clipped ME sequences (soft clipped by BWA). The red arrow indicates the insertion point.
