Abstract
Akinetes are dormancy cells commonly found among filamentous cyanobacteria, many of which are toxic and/or nuisance, bloom-forming species. Development of akinetes from vegetative cells is a process that involves morphological and biochemical modifications. Here, we applied a single-cell approach to quantify genome and ribosome content of akinetes and vegetative cells in Aphanizomenon ovalisporum (Cyanobacteria). Vegetative cells of A. ovalisporum were naturally polyploid and contained, on average, eight genome copies per cell. However, the chromosomal content of akinetes increased up to 450 copies, with an average value of 119 genome copies per akinete, 15-fold higher than that in vegetative cells. On the basis of fluorescence in situ hybridization, with a probe targeting 16S rRNA, and detection with confocal laser scanning microscopy, we conclude that ribosomes accumulated in akinetes to a higher level than that found in vegetative cells. We further present evidence that this massive accumulation of nucleic acids in akinetes is likely supported by phosphate supplied from inorganic polyphosphate bodies that were abundantly present in vegetative cells, but notably absent from akinetes. These results are interpreted in the context of cellular investments for proliferation following a long-term dormancy, as the high nucleic acid content would provide the basis for extended survival, rapid resumption of metabolic activity and cell division upon germination.
Similar content being viewed by others

Log in or create a free account to read this content
Gain free access to this article, as well as selected content from this journal and more on nature.com
or
References
Amann R, Binder BJ, Olson RJ, Chisholm SW, Devereux R, Stahl DA . (1990). Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl Environ Microbiol 56: 1919–1925.
Banker R, Carmeli S, Hadas O, Teltsch B, Porat R, Sukenik A . (1997). Identification of cylindrospermopsin in Aphanizomenon ovalisporum (Cyanophyceae) isolated from Lake Kinneret, Israel. J Phycol 33: 613–616.
Binder BJ, Chisholm SW . (1990). Relationship between DNA cycle and growth rate in Synechococcus sp. strain PCC 6301. J Bacteriol 172: 2313–2319.
Bremer H, Dennis P . (1996). Modulation of cell parameters by growth rate. In: Neidhardt RCI FC, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS et al., (eds) Escherichia coli and Salmonella: Cellular and Molecular Biology, 2nd edn. ASM press: Washington DC, pp 1553–1569.
Bresler V, Fishelson L . (2003). Polyploidy and polyteny in the gigantic eubacterium Epulopiscium fishelsoni. Marine Biol 143: 17–21.
Bresler V, Montgomery WL, Fishelson L, Pollak PE . (1998). Gigantism in a bacterium, Epulopiscium fishelsoni, correlates with complex patterns in arrangement, quantity, and segregation of DNA. J Bacteriol 180: 5601–5611.
Breuert S, Allers T, Spohn G, Soppa J . (2006). Regulated polyploidy in halophilic Archaea. PLoS ONE 1: e92.
Carmichael WW, Mahmood NA, Hyde EG . (1990). Natural toxins from cyanobacteria (blue-green algae). In: Hall S, Strichartz G (eds) Marine Toxins: Origin, Structure and Molecular Pharmacology. American Chemical Society: Washington DC, pp 87–106.
Codd GA, Bell SG, Kaya K, Ward CJ, Beattie KA, Metcalf JS . (1999). Cyanobacterial toxins, exposure routes and human health. Eur J Phycol 34: 405–415.
Codd GA, Morrison LF, Metcalf JS . (2005). Cyanobacterial toxins: risk management for health protection. Toxicol Appl Pharmacol 203: 264–272.
Daly MJ, Minton KW . (1995). Resistance to radiation. Science 270: 1318–1318.
Dittmann E, Wiegand C . (2006). Cyanobacterial toxins – occurrence, biosynthesis and impact on human affairs. Mol Nutr Food Res 50: 7–17.
Fay P . (1969a). Cell differentiation and pigment composition in Anabaena cylindrica. Arch Mikrobiol 67: 62–70.
Fay P . (1969b). Metabolic activities of isolated spores of Anabaena cylindrica. J Exp Bot 20: 100–109.
Hadas O, Pinkas R, Malinsky-Rushansky N, Shalev-Alon G, Delphine E, Berner T et al. (2002). Physiological variables determined under laboratory conditions may explain the bloom of Aphanizomenon ovalisporum in Lake Kinneret. Eur J Phycol 37: 259–267.
Hense I, Beckmann A . (2010). The representation of cyanobacteria life cycle processes in aquatic ecosystem models. Ecol Model 221: 2330–2338.
Hori K, Okamoto Ji, Tanji Y, Unno H . (2003). Formation, sedimentation and germination properties of Anabaena akinetes. Biochem Eng J 14: 67–73.
Hudnell HK, Ibelings BW, Havens KE . (2008). Cyanobacterial toxins: a qualitative meta–analysis of concentrations, dosage and effects in freshwater, estuarine and marine biota. Cyanobacterial Harmful Algal Blooms: State of the Science and Research Needs. Springer: New York, pp 675–732.
Kaplan-Levy RN, Hadas O, Summers ML, Rücker J, Sukenik A . (2010). Akinetes - dormant cells of cyanobacteria. In: Lubzens E, Cerda J, Clark MS (eds) Topics in Current Genetics. Springer-Verlag: Berlin, Heidelberg.
Kapuscinski J . (1995). DAPI: a DNA-specific fluorescent probe. Biotech Histochem 70: 220–233.
Karlsson-Elfgren I, Rengefors K, Gustafsson S . (2004). Factors regulating recruitment from the sediment to the water column in the bloom -forming cyanobacterium Gleotrichia echinulata. Fresh Biol 49: 265–273.
Kornberg A. (1995). Inorganic polyphosphate: toward making a forgotten polymer unforgettable. J Bacteriol 177: 491–496.
Labarre J, Chauvat F, Thuriaux P . (1989). Insertional mutagenesis by random cloning of antibiotic resistance genes into the genome of the cyanobacterium Synechocystis strain PCC 6803. J Bacteriol 171: 3449–3457.
Liu SV . (2009). How many genomes does the giant bacterium really have? Log Biol 9: 42–43.
Meeks JC, Campbell EL, Summers ML, Wong FC . (2002). Cellular differentiation in the cyanobacterium Nostoc punctiforme. Arch Microbiol 178: 395–403.
Mendell JE, Clements KD, Choat JH, Angert ER . (2008). Extreme polyploidy in a large bacterium. Proc Nat Acad Sci USA 105: 6730–6734.
Nilsson M, Bülow L, Wahlund K-G . (1997). Use of flow field-flow fractionation for the rapid quantitation of ribosome and ribosomal subunits in Escherichia coli at different protein production conditions. Biotechnol Bioeng 54: 461–467.
Ohtani N, Tomita M, Itaya M . (2010). An extreme thermophile, Thermus thermophilus, is a polyploid bacterium. J Bacteriol 192: 5499–5505.
Porter KJ, Feig YS . (1980). DAPI for identifying and counting aquatic microflora. Limnol Oceanog 25: 943–948.
Pelczar MJ. (ed) (1957). Manual for Microbiological Methods. McGraw-Hill: New York.
Robinow C, Angert ER . (1998). Nucleoids and coated vesicles of Epulopiscium spp. Arc Microbiol 170: 227–235.
Shi X, Rao NN, Kornberg A . (2004). Inorganic polyphosphate in Bacillus cereus: Motility, biofilm formation, and sporulation. Proc Natl Acad Sci USA 101: 17061–17065.
Siderius M, Musgrave A, Van Den Ende H, Koerten H, Cambier P, Van Der Meer P . (1996). Chlamydomonas eugametos (chlorophyta) stores phosphate in polyphosphate bodies together with calcium. J Phycol 32: 402–409.
Simon RD . (1977). Macromolecular composition of spores from the filamentous cyanobacterium Anabaena cylindrica. J Bacteriol 129: 1154–1155.
Stanier RY, Kunisawa R, Mandel M, Cohen-Bazire G . (1971). Purification and properties of unicellular blue-green algae: order Chroococcales. Bacteriol Rev 35: 171–205.
Sukenik A, Beardall J, Hadas O . (2007). Photosynthetic characterization of developing and mature akinetes of Aphanizomenon ovalisporum (cyanoprokaryota). J Phycol 43: 780–788.
Sukenik A, Stojkovic S, Malinsky-Rushansky N, Viner-Motzini Y, Beardall J . (2009). Fluorescence approaches reveal variations in cellular composition during formation of akinetes in the cyanobacterium Aphanizomenon ovalisporum. Eur J Phycol 44: 309–317.
van Apeldoorn ME, van Egmond HP, Speijers GJA, Bakker GJI . (2007). Toxins of cyanobacteria. Mol Nutr Food Res 51: 7–60.
Van Dok W, Hart BT . (1996). Akinete differentiation in Anabaena circinalis (Cyanophyta). J Phycol 32: 557–565.
Vendeville A, Larivière D, Fourmentin E . (2011). An inventory of the bacterial macromolecular components and their spatial organization. FEMS Microbiol Rev 35: 395–414.
Worden AZ, Binder BJ . (2003). Growth regulation of rRNA content in Prochlorococcus and Synechococcus (marine cyanobacteria) measured by whole-cell hybridization of rRNA-targeted peptide nucleic acids. J Phycol 39: 527–534.
Acknowledgements
This work was carried out at the Bay Paul Center, Marine Biology Laboratory and supported by the Gruss Lipper Foundation research award (AS). This study was part of the Joint German-Israeli-Project (FKZ 02WT0985, WR803) funded by the German Ministry of Research and Technology (BMBF) and Israel Ministry of Science and Technology (MOST). We thank Ms Katherine Hammar and Mr Blair Rossetti for their skillful technical help. Special thanks to Mr Christopher Rieken, Carl Zeiss Microimaging, Inc., for his resourceful advice and help.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Sukenik, A., Kaplan-Levy, R., Welch, J. et al. Massive multiplication of genome and ribosomes in dormant cells (akinetes) of Aphanizomenon ovalisporum (Cyanobacteria). ISME J 6, 670–679 (2012). https://doi.org/10.1038/ismej.2011.128
Received:
Revised:
Accepted:
Published:
Issue date:
DOI: https://doi.org/10.1038/ismej.2011.128
Keywords
This article is cited by
-
Understanding the transition to viable but non-culturable state in Escherichia coli W3110: a comprehensive analysis of potential spectrochemical biomarkers
World Journal of Microbiology and Biotechnology (2024)
-
Growth-rate dependency of ribosome abundance and translation elongation rate in Corynebacterium glutamicum differs from that in Escherichia coli
Nature Communications (2023)
-
Single-cell view of deep-sea microbial activity and intracommunity heterogeneity
The ISME Journal (2023)
-
Divergence of Biocrust Active Bacterial Communities in the Negev Desert During a Hydration-Desiccation Cycle
Microbial Ecology (2023)
-
Linking transcriptional dynamics of CH4-cycling grassland soil microbiomes to seasonal gas fluxes
The ISME Journal (2022)

