Abstract
Huntington disease (HD) is caused by an expansion of a CAG repeat. This repeat is a dynamic mutation that tends to undergo intergenerational instability. We report the analysis of the CAG repeat in a large population sample (2,000 chromosomes) covering all regions of Portugal, and a haplotype study of (CAG)n and (CCG)n repeats in 140 HD Portuguese families. Intermediate class 2 alleles represented 3.0% of the population; and two expanded alleles (36 and 40 repeats, 0.11%) were found. There was no evidence for geographical clustering of the intermediate or expanded alleles. The Portuguese families showed three different HD founder haplotypes associated with 7-, 9- or 10-CCG repeats, suggesting the possibility of different origins for the HD mutation among this population. The haplotype carrying the 7-CCG repeat was the most frequent, both in normal and in expanded alleles. In general, we propose that three mechanisms, occurring at different times, may lead to the evolution from normal CAGs to full expansion: first, a mutation bias towards larger alleles; then, a stepwise process that could explain the CAG distributions observed in the more recent haplotypes; and, finally, a pool of intermediate (class 2) alleles more prone to give rise to expanded HD alleles.
Similar content being viewed by others
Log in or create a free account to read this content
Gain free access to this article, as well as selected content from this journal and more on nature.com
or
References
Almqvist EW et al (1995) Ancestral differences in the distribution of the Δ 2642 glutamic acid polymorphism is associated with varying CAG repeat lengths on normal chromosomes: insights into the genetic evolution of Huntington disease. Hum Mol Genet 4:207–214
Andrés AM, Lao O, Soldevila M, Calafell F, Bertranpetit J (2002) Dynamics of CAG repeat loci revealed by the analysis of their variability. Hum Mutat 21:61–70
Andrew SE et al (1993) The relationship between trinucleotide (CAG) repeat length and clinical features of Huntington’s disease. Nat Genet 4:398–403
Andrew SE, Goldberg YP, Theilmann J, Zeisler J, Hayden MR (1994) A CCG repeat polymorphism adjacent to the CAG repeat in the Huntington disease gene: implications for diagnostic accuracy and predictive testing. Hum Mol Genet 3:65–67
Cossée M et al (1997) Evolution of the Friedreich’s ataxia trinucleotide repeat expansion: founder effect and premutations. Proc Natl Acad Sci USA 94:7452–7457
Costa MC et al (2003) Molecular diagnosis of Huntington disease in Portugal: implications for genetic counselling and clinical practice. Eur J Hum Genet 11:872–878
Duyao M et al (1993) Trinucleotide repeat length instability and age of onset in Huntington’s disease. Nat Genet 4:387–392
Goldberg YP et al (1993) Molecular analysis of new mutations for Huntington’s disease: intermediate alleles and sex of origin effects. Nat Genet 5:174–179
Goldberg YP et al (1995) Increased instability of intermediate alleles in families with sporadic Huntington disease compared to similar sized intermediate alleles in the general population. Hum Mol Genet 4:1911–1918
Guo SW, Thompson EA (1992) Performing the exact test of Hardy–Weinberg proportion for multiple alleles. Biometrics 48:361–372
Kremer B et al (1994) A worldwide study of Huntington’s disease mutation: the sensitivity and specificity of measuring CAG repeats. N Engl J Med 330:1401–1406
Martin JB, Gusella JF (1986) Huntington’s disease: pathogenesis and management. N Engl J Med 315:1267–1276
Masuda N, Goto J, Murayama N, Watanable M, Kondo R, Kanazawa I (1995) Analysis of triplet repeats in the Huntington gene in Japanese families affected with Huntington’s disease. J Med Genet 32:701–705
Paulson HL, Fischbeck KH (1996) Trinucleotide repeats in neurogenetic disorders. Annu Rev Neurosci 19:79–107
Pramanik S et al (2000) Analysis of CAG and CCG repeats in Huntington gene among HD patients and normal populations of India. Eur J Hum Genet 8:678–682
Raymond M, Rousset F (1995) GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. J Hered 86:284–249
Rubinsztein DC et al (1994) Mutational bias provides a model for the evolution of Huntington’s disease and predicts a general increase in disease prevalence. Nat Genet 7:525–530
Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning—a laboratory manual, 2nd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
Squitieri F et al (1994) DNA haplotype analysis of Huntington disease reveals clues to the origins and mechanisms of CAG expansion and reasons for geographic variations of prevalence. Hum Mol Genet 3:2103–2114
The American College of Medical Genetics, American Society of Human Genetics, Huntington Disease Genetic Testing Working Group (1998) Laboratory guidelines for Huntington disease genetic testing. Am J Hum Genet 62:1243–1247
The Huntington Collaborative Research Group (1993) A novel gene containing a trinucleotide repeat that is expanded and unstable on Huntington’s disease chromosomes. Cell 72:971–983
Vuillaume I, Vermersch P, Destée A, Petit H, Sablonnière B (1998) Genetic polymorphisms adjacent to the CAG repeat influence clinical at onset in Huntington’s disease. J Neurol Neurosurg Psychiatry 64:758–762
Watkins WS, Bamshad M, Jorde LB (1995) Population genetics of trinucleotide repeat polymorphisms. Hum Mol Genet 4:1485–1491
Acknowledgements
We would like to thank the Instituto de Genética Médica Jacinto Magalhães, who provided us with the Guthrie cards. We also thank Cláudia Sofia Santos and Anabela Ferro for their laboratory help, and to all patients and all the neurologists who collaborated in this study. Maria do Carmo Costa is the recipient of a scholarship from FCT (SFRH/BD/9759/2003).
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Costa, M.d.C., Magalhães, P., Guimarães, L. et al. The CAG repeat at the Huntington disease gene in the Portuguese population: insights into its dynamics and to the origin of the mutation. J Hum Genet 51, 189–195 (2006). https://doi.org/10.1007/s10038-005-0343-8
Received:
Accepted:
Published:
Issue date:
DOI: https://doi.org/10.1007/s10038-005-0343-8
Keywords
This article is cited by
-
Huntington’s Chorea—a Rare Neurodegenerative Autosomal Dominant Disease: Insight into Molecular Genetics, Prognosis and Diagnosis
Applied Biochemistry and Biotechnology (2021)
-
Management of information within Portuguese families with Huntington disease: a transgenerational process for putting the puzzle together
European Journal of Human Genetics (2020)
-
Huntington disease
Nature Reviews Disease Primers (2015)
-
Haplotype analysis of the CAG and CCG repeats in 21 Brazilian families with Huntington’s disease
Journal of Human Genetics (2012)


