Table 2 Comparison of used amplification protocols to detect exon 23 skipping in the mdx mouse model
From: Accurate quantification of dystrophin mRNA and exon skipping levels in Duchenne Muscular Dystrophy
This paper | Wu, 2009 | Yin, 2008 | Ivanova, 2008 | Heemskerk, 2009 | Lu, 2005 | Vitiello, 2008 | Doran, 2009 | Denti, 2008 | |
|---|---|---|---|---|---|---|---|---|---|
No. of cycles | 30 | 40 | (25+25) | (25+25) | (19+32)a | (30+25) | (30+30)a | (35+30) | (40+30)b |
RNA template ng in RT reaction | 400 | 100 | 200 | 800 | 400 | 200 | 500 | 100 | 200 |
RNA template ng in PCR | 30 | 100 | 200 | 800 | 60 | 200 | 50 | 100 | 200 |
No. of transcripts | 665 | 2215 | 4430 | 17721 | 1329 | 4430 | 1108 | 2215 | 4430 |
Compared with 30 cycles | 1 | 1024 | 1.E+06 | 1.E+06 | 2.E+06 | 3.E+07 | 1.E+09 | 3.E+10 | 1.E+12 |