Table 1 Characteristics of 15 selected snoRNAs
From: Overexpression of SNORD114-3 marks acute promyelocytic leukemia
snoRNA | Type | Host gene | Chromosome | Target | Probes |
|---|---|---|---|---|---|
SCARNA2 | Small cajal body | Independent transcriptional unit | 1q13.1 | U2 snRNA C61 and U2 snRNA G11 | 11 |
SCARNA17 | Small cajal body | Independent transcriptional unit | 18q21.1 | U4 snRNA C8 | 11 |
SNORA25 | Box H/ACA | Homo sapiens cDNA AK128061 | 11q21 | 18S rRNA U801 and 18S rRNA U814 | 6 |
SNORA61 | Box H/ACA | SNHG12 small nucleolar RNA host gene 12 (non-protein coding) | 1p35.3 | 28S rRNA U2495 | 7 |
SNORA64 | Box H/ACA | RPS2 (ribosomal protein S2) | 16p13.3 | 28S rRNA U4975 | 10 |
SNORA65 | Box H/ACA | RPL12 (ribosomal protein L12) | 9q34 | 28S rRNA U4373 and 28S rRNA U4427 | 4 |
SNORA66 | Box H/ACA | RPL5 (ribosomal protein L5) | 1p22.1 | 18S rRNA U119 | 5 |
SNORA68 | Box H/ACA | RPL18A (ribosomal protein L18a) | 19p13 | 28S rRNA U4393 | 22 |
SNORA70 | Box H/ACA | RPL10 (ribosomal protein L10) | Xq28 | 18S rRNA U1692 | 4 |
SNORA71A | Box H/ACA | SNHG17 small nucleolar RNA host gene 17 (non-protein coding) | 20q11.23 | 18S rRNA U406 | 4 |
SNORA71B | Box H/ACA | SNHG17 small nucleolar RNA host gene 17 (non-protein coding) | 20q11.23 | 18S rRNA U406 | 22 |
SNORA74A | Box H/ACA | SNHG4 small nucleolar RNA host gene 4; MATR3 alt Matrin3 mRNA | 5q31.2 | 28S rRNA U3741, 28S rRNA U3743 and U3 snRNA U8 | 33 |
SNORD8 | Box C/D | CHD8 chromodomain helicase DNA binding protein 8 | 14q11.2 | U6 snRNA A53 | 5 |
SNORD104 | Box C/D | Independent transcriptional unit | 17q23.3 | 28S rRNA C1327 | 5 |
SNORD114-3 | Box C/D | LOC100507242, snoRNA gene cluster | 14q32 | Unknown | 4 |
