Table 3 Through literature search, we found evidence to support six out of the eight new potential interactions identified that enable the temporal dynamics of differentiation to be satisfied (Figure 5c,d)
From: A method to identify and analyze biological programs through automated reasoning
Interaction | Experimental evidence |
|---|---|
Nkx2.5 --> canWnt | Cambier et al.26 show that Nkx2.5 regulates cardiac growth, activating Wnt through induction of R-Spondin3, a positive regulator of canonical Wnt. |
Mesp1 --| canWnt | David et al.27 show that Mesp1 induces DKK, an inhibitor of canonical Wnt signaling during cardiovascular differentiation (Mesp1 --> Dkk1 --| cantWnt). |
GATAs --> canWnt | Afouda et al.28 show that inhibition of Gata4 and Gata6 results in reduced expression of cardiac markers and Wnt11. |
Bmp2 --> canWnt | Papathanasiou et al.29 show that BMP2 activates canonical Wnt signaling through induction of LRP-5, a Wnt co-receptor. Rosen30 reviews results showing that, in bone development, Bmp2 knockout leads to downregulation of several Wnt pathway components and targets. |
Foxc1/2 --| Tbx5 | Hilton et al.31 show that there may be an indirect regulation via Pitx2. |
Foxc1/2 --> canWnt | Seo and Kume32 show that Wnt expression is absent in Foxc1−/−; Foxc2−/− compound mutants. |