Table 1 Primers used in this study

From: CD82 hypomethylation is essential for tuberculosis pathogenesis via regulation of RUNX1-Rab5/22

Gene

Sense primer

Antisense primer

Size (bp)

Tm (°C)

mCD82 genotyping

CAC CCT CCT GCA CTC AAT CT

CCA CCT GTG ACA ACC AAG TG

612

60

mCD82 methylation 1

GTT ATT GTT TTT CGT GTG AGA TTT C

ACC TTC CAT ATT ATT AAA ACA CCG A

159

65.7

mCD82 Un-methylation 1

TTA TTG TTT TTT GTG TGA GAT TTT GA

CCT TCC ATA TTA TTA AAA CAC CAA A

157

65.2

mCD82 methylation 2

TCG TAG ATT TAT TTT AGG GGT GTT C

AAT CTA CCT ATA TTT CCT TCC CGA C

182

66.5

mCD82 Un-methylation 2

TGT AGA TTT ATT TTA GGG GTG TTT GT

AAT CTA CCT ATA TTT CCT TCC CAA C

181

66.1

mdnmt1

GGG TCT CGT TCA GAG CTG

GCA GGA ATT CAT GCA GTA AG

201

60

mdnmt2

CCG CCT CTT CTT TGA GTT CTA C

AGA TGT CCC TCT TGT CAC TAA CG

125

55

mdnmt3

ATG GAG ATC AGG AGG GTA TGG A

GTC GCT TGG AGG TGG CTT TC

177

56

mtet1

GCA CCC CAA CC TAA TCA TC

ACC TTC ATT AGC TGC CTG GT

172

58

mtet2

ACA GAA GCA AGA ACA GCA GC

AGC TTG CAG GTG GAT TCT CT

176

59

mtet3

CCC CTT CCC ACT TCA CG AT

CAC AGC TTG TCT TGG AAC CC

229

59

mβ-actin

AAG TGT GAC GTT GAC ATC CG

GAT CCA CAT CTG CTG GAA GG

222

58

mCD82 ChIP-PCR

GCC ATT GTT TCC CGT GTG AGA CCT CG

TGC CTT CCA TGT TGT TGA GGC ACC GG

160

58