Table 2 Characteristics of GEO datasets.

From: Hypoxia-hindered methylation of PTGIS in endometrial stromal cells accelerates endometriosis progression by inducing CD16 NK-cell differentiation

Dataset

Platform

Positions

Category

Type

Sample size

GSE23339

GPL6102

Ovarian

Transcription

Tissue

N (9) vs. OE (10)

GSE7305

GPL570

Ovarian

Transcription

Tissue

N (10) vs. OE (10)

GSE5108

GPL2895

Ovarian & Peritoneal

Transcription

Tissue

N (10) vs. OE (8) vs. PE (3)

GSE25628

GPL571

Deep Infiltrating EMs

Transcription

Tissue

N (6) vs. DEU (8) vs. DEC (8)

GSE11691

GPL96

Broad Ligament & Peritoneal

Transcription

Tissue

N (9) vs. BE (7) vs. PE (2)

GSE78851

GPL6244

Adenomyosis

Transcription

Tissue

N (5) vs. AE (3)

GSE12768

GPL7304

Ovarian

Transcription

Tissue

N (2) vs. OE (2)

GSE6364

GPL570

Ovarian

Transcription

Tissue

N (16) vs. OE (21)

GSE94414

GPL22166

Ovarian, Peritoneal & Retrocervical

Transcription

Tissue

N (6) vs. OE (4) vs. PE (4) vs. RE (1)

GSE58178

GPL6947

Ovarian

Transcription

ESCs

N (6) vs. OE (6)

GSE87809

GPL11154

Ovarian

Transcription

ESCs

N (5) vs. OE (4)

GSE31515

GPL6480

Ovarian

Transcription

ESCs

N (3) vs. OEU (3) vs. OEC (3)

GSE47360

GPL6244

Ovarian

Transcription

ESCs

N (3) vs. OEU (3) vs. OEC (3)

GSE73950

GPL13534

Ovarian

DNA Methylation

Tissue

N (17) vs. OEU (26)

GSE47361

GPL6244

Ovarian

DNA Methylation

ESCs

N (3) vs. OEU (3) vs. OEC (3)

GSE87621

GPL13534

Ovarian

DNA Methylation

ESCs

N (5) vs. OE (4)

  1. N normal, OE ovarian endometriosis, PE peritoneal endometriosis, DEU eutopic endometrium of deep infiltrating endometriosis, DEC ectopic endometrium of deep infiltrating endometriosis, BE broad ligament endometriosis, AE adenomyosis, RE retrocervical, OEU eutopic endometrium of ovarian endometriosis, OEC ectopic endometrium of ovarian endometriosis.