Fig. 5 | International Journal of Oral Science

Fig. 5

From: Chromatin conformation of human oral epithelium can identify orofacial cleft missing functional variants

Fig. 5

Epi-promoter training set confirmed the risk of rs174570 and rs56789 in NSCPO. a Receiver Operating Characteristic (ROC) and Precision-Recall (PR) curves using the gkmSVM trained on AEs interacting with all promoters in hg19 (promoter training set) and AEs interacting with all promoters for genes expressed (TPM > 0.5) in oral epithelial cells (Epi-promoter training set). b Box and whisker plots of deltaSVM scores for 1 000 random SNPs in genome and rs174570, rs56789, scored by classifiers by promoter training set and Epi-promoter training set

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