Table 1 SKCM barcodes representing ECM structural proteins with mutant AA adjacent or NOT adjacent to MMP2-sensitive sites

From: Potential MMP2-mediated availability of HLA binding, mutant ECM peptides reflects better melanoma survival rates and greater T-cell infiltrates

Number of SKCM barcodes with a mutant AA adjacent to an MMP2-sensitive site, defined as > 70% of the maximum score (Methods)

Number of SKCM barcodes with NO mutant AA adjacent to an MMP2-sensitive site (i.e., all barcodes with an ECM structural protein mutant AA not in left-side column)

Total number of SKCM barcodes with mutant AA in the ECM structural protein set

p-value representing the distinction between columns 1 and 2

197

145

342

0.0001

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