Table 2 Median allele frequencies and types of somatic mutations newly detected or undetected in PDX models.
From: Complex genetic and histopathological study of 15 patient-derived xenografts of aggressive lymphomas
A. | Median AF of N/D mutations in PDXs | Median AF of N/U mutations in patient samples |
|---|---|---|
All PDX models | 0.18 | 0.15 |
DLBCL | 0.27 | 0.14 |
MCL | 0.18 | 0.36 |
T-NHL | 0.15 | 0.14 |
BLa | 0.17 | 0.11 |
B. | N/D from the Gene-list | N/U from the Gene-list |
VFN-D1 vs P3 | ETV6 | RUNX1 |
VFN-D3 vs P1 | PDGFRA | 0 |
VFN-D4 vs P4 | NF1, HIPK3 | 0 |
VFN-D5 vs P5 | ITPKB, ENAM | 0 |
VFN-D6 vs P2 | IRF4, RNF213, MYC, FOXO1, KLHL14, KLHL14, OSBPL10 | 0 |
VFN-D20 vs P7 | 0 | 0 |
VFN-M1 vs P10 | 0 | 0 |
VFN-M5R1 vs P9 | 0 | 0 |
VFN-T3 vs P11 | STAT1, ZNF708, RHOA | 0 |
VFN-T4 vs P15 | SPEN, FSIP2, DCC, ZNF532 | 0 |
VFN-T5 vs P14 | AIRD1B, VPS13A, MYD88 | 0 |
VFN-T6 vs P13 | IRF2BP2, VAV1, TCF20 | BIRC6 |
VFN-B3 vs P8 | 0 | 0 |