Table 1 Data collection and structure refinement statistics of DUX4 HD2 associated with ERG site
From: DUX4HD2-DNAERG structure reveals new insight into DUX4-Responsive-Element
Protein | DUX4HD2-DNAERG |
|---|---|
Data collection | |
Space group | P31 |
Unit cell dimension (Ã…) | |
  a | 32.6 |
  b | 32.6 |
  c | 126.6 |
Molecule per ASU | 2HD2, 1 double-chain DNAERG |
Derivative | Native |
Source/Stationa | BL19U |
Wavelength (Ã…) | 0.9785 |
Resolution range (Å) | 63.3–1.60 |
Observations (I / σ(I) > 0) | 160629 |
Unique reflections (I / σ(I) > 0) | 19696 (2803) |
High-resolution shell (Å) | 1.69–1.60 |
Rsym (%)b,c: | 7.2 (91.2) |
<I / σ(I)>c: | 11.4 (1.8) |
Completenessc (%): | 99.2 (97.0) |
Redundancyc: | 8.2 (6.8) |
CC1/2 | 0.99 (0.76) |
Structure refinement | |
 Resolution range (Å) | 28.2–1.60 |
 R-factor (%) | 20.1 |
 R-factor (high-resolution shell)d | 28.3 |
 Rfree (%)e | 20.7 |
 Rfree (high-resolution shell) | 34.7 |
 Total number of non-hydrogen atoms | 1492 |
   Protein atoms | 1376 |
   Water molecules | 116 |
R.m.s. deviations:f | |
  Bond length (Å) | 0.013 |
  Bond angle (°) | 1.227 |
  Main chain B-factors (Å2) | 3.676 |
  Side-chain B-factors (Å2) | 7.047 |
Wilson B-factor (Ã…2) | 28.4 |
Average B-factor protein atoms (Ã…2) | 40.3 |
Ramachandran statistics (%) | |
  Most favored region | 96.4 |
  Allowed regions | 3.6 |
  Outliers | 0 |