Table 1 sgRNA sequences and oligonucleotides.

From: CRISPR/Cas9-mediated t(4;11) translocation in human hematopoietic stem/precursor cells demonstrates plasticity to differentiate into either the myeloid or lymphoid lineage

sgRNAs:

Name

Sequence 5’ → 3’

Source

sgMLL.intron 9

U*U*C*CUAGGCUAGAACAUGUG + 80-mer Synthego modified EZ Scaffold

Synthego

sgAF4.intron 3

C*A*G*UGUGGCGUGUAUUACGU + 80-mer Synthego modified EZ Scaffold

Synthego

Oligonucleotides:

Name

Sequence 5’ → 3’

Source

MLL.ex9.sg.gDNA fw

CAAAAACCAAAAGAAAAGGTGAGGAGA

Eurofins

MLL.ex10.gDNA rev

ATTGACCGGAGGTGGTTTTTCCTAAG

Eurofins

AF4.I3.sg.1 gDNA fw

CTTATTTCTTCCTCAAAACAACCCTGTAAG

Eurofins

AF4.I3.sg.1 gDNA rev

GGGGAAGGAATAGGGGGAAGAT

Eurofins

MLL 8.3

CCCAAAACCACTCCTAGTGAG

Eurofins

MLL 13.5

CAGGGTGATAGCTGTTTCGG

Eurofins

AF4.3

GTTGCAATGCAGCAGAAGCC

Eurofins

AF4.5

ACTGTCACTGTCCTCACTGTC

Eurofins