Table 1 Annotations for SNPs that showed significant and consistent impacts in both SH-SY5Y and SK-N-BE(2) cell lines by PASSPORT-seq

BLA

PEAK1

rs17381821

18

Yes

miR-3913-3p^a

BLA

PNP

rs1079375

32

Yes

CE

HELQ

rs4693089

34

Yes

PABPC1, ELAVL1

CE

KIF1B

rs1065828

33

Yes

IGF2BP1

CE

KIF1B

rs1536262

45

Yes

IGF2BP1

CE

PACRGL

rs6812257

31

Yes

ELAVL1, PABPC1

CE

ZNF625

rs59816741

1

No

NAC

LYPD5

rs4525602

3

No

NAC

PCDHB16

rs2338530

10

Yes

PABPC1

NAC

PRLR

rs173627

24

No

PABPC1

NAC

SLC16A4

rs11120

18

Yes

ELAVL1, PABPC1

miR-200b-3p^b, miR-200c-3p^a, miR-374c-5p^a, miR-429^c, miR-4330^b, miR-510-5p^a, miR-512-5p^b, miR-655-3p^b, miR-8084^a, miR-3942-3p^c, miR-506-5p^c, miR-5100^b, miR-6074^a, miR-889-3p^c, miR-892c-5p^a

NAC

SMPD4

rs10909567

38

Yes

IGF2BP1

NAC

SYT9

rs10732510

48

No

miR-3925-3p^b, miR-136-5p^c, miR-4695-3p^a, miR-665^a, miR-766-3p^c

SFC

CA13

rs4617148

45

Yes

ELAVL1, PABPC1, IGF2BP1

miR-3125^c, miR-3916^c, miR-6859-5p^a, miR-6866-5p^a, miR-877-5p^c, miR-4496^c

SFC

CA13

rs4740047

42

Yes

ELAVL1, PABPC1, IGF2BP1

SFC

FKTN

rs2010861

13

Yes

ELAVL1, PABPC1

miR-6840-3p^a

SFC

LRPAP1

rs11723071

20

Yes

SFC

LRPAP1

rs11729369

25

Yes

SFC

LRPAP1

rs13325

13

No

SFC

LRPAP1

rs140653273

1

No

SFC

MAVS

rs6515831

31

Yes

miR-4289^a

SFC

PODN

rs899974

19

No

SFC

PPARA

rs10154348

7

Yes

ELAVL1, PABPC1, CELF1

miR-7155-5p^a

SFC

SNX18

rs2565014

35

Yes

PABPC1

miR-4655-3p^a

miR-7848-3p^a

SFC

UQCC1

rs3764732

14

No

PABPC1

miR-3922-5p^a, miR-513c-5p^b, miR-514b-5p^c, miR-330-3p^c, miR-371a-5p^a, miR-371b-5p^c, miR-372-5p^a, miR-373-5p^b, miR-616-5p^c, miR-7109-3p^a