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  • Clinical Research Article
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Machine learning models for neurocognitive outcome prediction in preterm born infants

A Comment to this article was published on 23 May 2025

Abstract

Background

Outcome prediction after preterm birth is important for long-term neonatal care, but has proven notoriously challenging for neurocognitive outcome. This study investigated the potential of machine learning to improve neurocognitive outcome prediction at two and five years of corrected age in preterm infants, using readily available predictors from the neonatal setting.

Methods

Predictors originating from the antenatal and neonatal period of preterm infants born <30 weeks gestation were used to predict adverse neurocognitive outcome on the Bayley Scale and Wechsler Preschool and Primary Scale of Intelligence. Machine learning models were compared to conventional logistic regression and validated using internal cross-validation.

Results

Best performing models were a random forest (two-year outcome) and a support vector machine (five-year outcome) with an area under the receiver operating characteristic curve (AUC) of 0.682 and 0.695 respectively, reaching high negative predictive values (95% and 91%, respectively). These models performed significantly better than the conventional models.

Conclusions

The models reached moderate overall predictive performance, yet with promising potential for early identification of children without adverse neurocognitive outcome. Machine learning modestly improved neurocognitive outcome prediction. Future research may harvest the predictive potential of a wider variety of routine (clinical) data, such as vital sign time series.

Impact

  • Early prediction of neurocognitive outcome in preterm infants will enable targeted follow-up and deployment of early (preventative) interventions to improve outcome.

  • Neurocognitive outcome remains notoriously challenging using conventional models, while existing machine learning models depend on advanced MRI-derived predictors with limited potential for implementation into daily clinical practice.

  • This study developed machine learning models for neurocognitive outcome prediction using predictors that are readily available in neonatal settings.

  • Neurocognitive outcome prediction remains challenging due to low AUC and PPV, however, the models demonstrate high NPV, indicating potential for identifying children at low risk for adverse outcome.

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Fig. 1: Flowchart.
Fig. 2: Alluvial plot.
Fig. 3: ROC-curves of tested models for two and five-year neurocognitive outcome.
Fig. 4: Visual display of the relative influence of predictors of the best models.

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Data availability

The datasets analyzed during the current study are not publicly available due to privacy restrictions on the medical data. However, they are available from the corresponding author on reasonable request, subject to compliance with privacy regulations.

References

  1. Allotey, J. et al. Cognitive, Motor, Behavioural and Academic Performances of Children Born Preterm: A Meta-Analysis and Systematic Review Involving 64 061 Children. BJOG 125, 16–25 (2018).

    Article  CAS  PubMed  Google Scholar 

  2. Stoll, B. J. et al. Trends in Care Practices, Morbidity, and Mortality of Extremely Preterm Neonates, 1993-2012. JAMA 314, 1039–1051 (2015).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  3. Twilhaar, E. S. et al. Cognitive Outcomes of Children Born Extremely or Very Preterm since the 1990s and Associated Risk Factors: A Meta-Analysis and Meta-Regression. JAMA Pediatr. 172, 361–367 (2018).

    Article  PubMed  PubMed Central  Google Scholar 

  4. Gottfredson, L. S. Intelligence: Is It the Epidemiologists’ Elusive “Fundamental Cause” of Social Class Inequalities in Health? J. Pers. Soc. Psychol. 86, 174–199 (2004).

    Article  PubMed  Google Scholar 

  5. Koenen, K. C. et al. Childhood Iq and Adult Mental Disorders: A Test of the Cognitive Reserve Hypothesis. Am. J. Psychiatry 166, 50–57 (2009).

    Article  PubMed  Google Scholar 

  6. Petrill, S. A. & Wilkerson, B. Intelligence and Achievement: A Behavioral Genetic Perspective. Educ. Psychol. Rev. 12, 185–199 (2000).

    Article  Google Scholar 

  7. Strenze, T. Intelligence and Socioeconomic Success: A Meta-Analytic Review of Longitudinal Research. Intelligence 35, 401–426 (2007).

    Article  Google Scholar 

  8. van Beek, P. E. et al. Two-Year Neurodevelopmental Outcome in Children Born Extremely Preterm: The Epi-Daf Study. Arch. Dis. Child Fetal Neonatal Ed. 107, 467–474 (2022).

    Article  PubMed  Google Scholar 

  9. Johnson, K. B. et al. Precision Medicine, Ai, and the Future of Personalized Health Care. Clin. Transl. Sci. 14, 86–93 (2021).

    Article  PubMed  Google Scholar 

  10. Hadders-Algra, M. Early Diagnosis and Early Intervention in Cerebral Palsy. Front. Neurol. 5, 185 (2014).

    Article  PubMed  PubMed Central  Google Scholar 

  11. Jeukens-Visser, M. et al. Development and Nationwide Implementation of a Postdischarge Responsive Parenting Intervention Program for Very Preterm Born Children: The Top Program. Infant Ment. Health J. 42, 423–437 (2021).

    Article  PubMed  Google Scholar 

  12. Kitsios, G. D. & Kent, D. M. Personalised Medicine: Not Just in Our Genes. BMJ 344, e2161 (2012).

    Article  PubMed  PubMed Central  Google Scholar 

  13. Statline. Zorguitgaven; Kerncijfers, (2023). https://opendata.cbs.nl/#/CBS/nl/dataset/84047NED/table.

  14. Crilly, C. J., Haneuse, S. & Litt, J. S. Predicting the Outcomes of Preterm Neonates Beyond the Neonatal Intensive Care Unit: What Are We Missing? Pediatr. Res. 89, 426–445 (2021).

  15. Lodha, A., Sauve, R., Chen, S., Tang, S. & Christianson, H. Clinical Risk Index for Babies Score for the Prediction of Neurodevelopmental Outcomes at 3 Years of Age in Infants of Very Low Birthweight. Dev. Med. Child Neurol. 51, 895–900 (2009).

    Article  PubMed  Google Scholar 

  16. Greenwood, S. et al. Can the Early Condition at Admission of a High-Risk Infant Aid in the Prediction of Mortality and Poor Neurodevelopmental Outcome? A Population Study in Australia. J. Paediatr. Child Health 48, 588–595 (2012).

    Article  PubMed  Google Scholar 

  17. Van’t Hooft, J. et al. Predicting Developmental Outcomes in Premature Infants by Term Equivalent Mri: Systematic Review and Meta-Analysis. Syst. Rev. 4, 71 (2015).

    Article  PubMed  PubMed Central  Google Scholar 

  18. van Boven, M. R. et al. Machine Learning Prediction Models for Neurodevelopmental Outcome after Preterm Birth: A Scoping Review and New Machine Learning Evaluation Framework. Pediatrics 150, e2021056052 (2022).

  19. Lonsdale, H., Jalali, A., Ahumada, L. & Matava, C. Machine Learning and Artificial Intelligence in Pediatric Research: Current State, Future Prospects, and Examples in Perioperative and Critical Care. J. Pediatr. 221S, S3–S10 (2020).

    Article  PubMed  Google Scholar 

  20. Girault, J. B. et al. White Matter Connectomes at Birth Accurately Predict Cognitive Abilities at Age 2. Neuroimage 192, 145–155 (2019).

    Article  PubMed  Google Scholar 

  21. Saha, S. et al. Predicting Motor Outcome in Preterm Infants from Very Early Brain Diffusion Mri Using a Deep Learning Convolutional Neural Network (Cnn) Model. Neuroimage 215, 116807 (2020).

    Article  PubMed  Google Scholar 

  22. FDA Drug Safety Communication: FDA Review Results in New Warnings About Using General Anesthetics and Sedation Drugs in Young Children and Pregnant Women, https://www.fda.gov/drugs/drug-safety-and-availability/fda-drug-safety-communication-fda-review-results-new-warnings-about-using-general-anesthetics-and (2016).

  23. Juul, S. E. et al. Predicting 2-Year Neurodevelopmental Outcomes in Extremely Preterm Infants Using Graphical Network and Machine Learning Approaches. EClinicalMedicine 56, 101782 (2023).

    Article  PubMed  Google Scholar 

  24. Ambalavanan, N. et al. Early Prediction of Poor Outcome in Extremely Low Birth Weight Infants by Classification Tree Analysis. J. Pediatr. 148, 438–444 (2006).

    Article  CAS  PubMed  Google Scholar 

  25. Ambalavanan, N. et al. Prediction of Neurologic Morbidity in Extremely Low Birth Weight Infants. J. Perinatol. 20, 496–503 (2000).

    Article  CAS  PubMed  Google Scholar 

  26. Luttikhuizen dos Santos, E. S., de Kieviet, J. F., Konigs, M., van Elburg, R. M. & Oosterlaan, J. Predictive Value of the Bayley Scales of Infant Development on Development of Very Preterm/Very Low Birth Weight Children: A Meta-Analysis. Early Hum. Dev. 89, 487–496 (2013).

    Article  PubMed  Google Scholar 

  27. Luo, W. et al. Guidelines for Developing and Reporting Machine Learning Predictive Models in Biomedical Research: A Multidisciplinary View. J. Med Internet Res 18, e323 (2016).

    Article  PubMed  PubMed Central  Google Scholar 

  28. Collins, G. S., Reitsma, J. B., Altman, D. G. & Moons, K. G. Transparent Reporting of a Multivariable Prediction Model for Individual Prognosis or Diagnosis (Tripod): The Tripod Statement. BMJ 350, g7594 (2015).

    Article  PubMed  Google Scholar 

  29. Bayley, N. Bayley Scales of Infant and Toddler Development, Third Edition, San Antonio, TX: Harcourt Assessment, 2006.

  30. Hendriksen, J. & Hurks, P. WPPSI III Wechsler Preschool and Primary Scale of Intelligence Nederlandse bewerking (3rd ed), Pearson Assessment and Information BV. Amsterdam 2009.

  31. Davison, A. C. & Hinkley, D. V. Bootstrap Methods and Their Application (Cambridge University Press, 1997).

  32. Kelly, C. J., Karthikesalingam, A., Suleyman, M., Corrado, G. & King, D. Key Challenges for Delivering Clinical Impact with Artificial Intelligence. BMC Med. 17, 195 (2019).

    Article  PubMed  PubMed Central  Google Scholar 

  33. Menze, B. H. et al. A Comparison of Random Forest and Its Gini Importance with Standard Chemometric Methods for the Feature Selection and Classification of Spectral Data. BMC Bioinforma. 10, 213 (2009).

    Article  Google Scholar 

  34. Molnar, C. Interpretable Machine Learning, 2 edn (2022). https://christophm.github.io/interpretable-ml-book.

  35. Mandrekar, J. N. Receiver Operating Characteristic Curve in Diagnostic Test Assessment. J. Thorac. Oncol. 5, 1315–1316 (2010).

    Article  PubMed  Google Scholar 

  36. EFCNI, Wolke, D. & Leemhuis, A. G. European Standards of Care for Newborn Health: Cognitive development. (2018).

  37. He, L. et al. A Multi-Task, Multi-Stage Deep Transfer Learning Model for Early Prediction of Neurodevelopment in Very Preterm Infants. Sci. Rep. 10, 15072 (2020).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  38. Poldrack, R. A., Huckins, G. & Varoquaux, G. Establishment of Best Practices for Evidence for Prediction: A Review. JAMA Psychiatry 77, 534–540 (2020).

  39. Rajput, D., Wang, W. J. & Chen, C. C. Evaluation of a Decided Sample Size in Machine Learning Applications. BMC Bioinforma. 24, 48 (2023).

    Article  Google Scholar 

  40. Flynn, R. S., Huber, M. D. & DeMauro, S. B. Predictive Value of the Bsid-Ii and the Bayley-Iii for Early School Age Cognitive Function in Very Preterm Infants. Glob Pediatr Health 7, 2333794X20973146 (2020).

  41. Anderson, P. J. et al. Underestimation of Developmental Delay by the New Bayley-Iii Scale. Arch. Pediatr. Adolesc. Med. 164, 352–356 (2010).

    Article  PubMed  Google Scholar 

  42. Bancalari, E. & del Moral, T. Bronchopulmonary Dysplasia and Surfactant. Biol. Neonate 80, 7–13 (2001).

    Article  CAS  PubMed  Google Scholar 

  43. Jobe, A. H. & Bancalari, E. Bronchopulmonary Dysplasia. Am. J. Respir. Crit. Care Med 163, 1723–1729 (2001).

    Article  CAS  PubMed  Google Scholar 

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Authors and Affiliations

Authors

Contributions

Van Boven: Conceptualization, Methodology, Validation, Formal analysis, Data Curation, Writing – Original Draft, Visualization, Project administration. Bennis: Methodology, Software, Validation, Formal analysis, Data Curation, Writing – Review & Editing. Frings, Tran: Methodology, Software, Validation, Writing: Review & Editing. Onland, Aarnoudse-Moens, Katz, Romijn: Resources, Data Curation, Writing – Review & Editing. Leemhuis, Van Kaam: Conceptualization, Methodology, Resources, Writing – Review & Editing. Hoogendoorn: Methodology, Writing- Review & Editing, Supervision. Oosterlaan, Königs: Conceptualization, Methodology, Writing – Review & Editing, Supervision, Project administration.

Corresponding author

Correspondence to Menne R. van Boven.

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Competing interests

The authors declare no competing interests.

Ethics

All procedures and data-gathering was part of the routine care. The re-use of the data for this study was approved by the medical ethical committee of the Academic Medical Centre (registration-number: W21_516 # 21.569), and in accordance with the 1964 Declaration of Helsinki and its later amendments. Parents of the included infants provided informed consent to re-use their data for scientific purpose.

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van Boven, M.R., Bennis, F.C., Onland, W. et al. Machine learning models for neurocognitive outcome prediction in preterm born infants. Pediatr Res 98, 942–949 (2025). https://doi.org/10.1038/s41390-025-03815-6

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