Table 4 Proteinaceous inhibitors blocking the HR1-HR2 interaction

From: Targetable elements in SARS-CoV-2 S2 subunit for the design of pan-coronavirus fusion inhibitors and vaccines

Name

Constructs

IC50s of viral S-mediated cell-cell fusion (nM)

IC50s of pseudotyped coronaviruses (nM)

IC50s of Live coronaviruses (nM)

Protective efficacy

Refs.

HR1MFd

HR1(E918-V952)-Fd

WT: 740

WT: 1230, Alpha: 2350, Omicron: 1060, SARS-CoV: 2130, MERS-CoV: 2860

N.A.

N.A.

96

5-HB-H2

HR1-HR2-HR1-HR2-HR1-His (HR1:E918-L966; HR2: D1168-L1203)

SARS-CoV-2: 630

WT: 590, Beta: 3080, Omicron: 1630, Kappa: 3250, Delta: 2660, RaTG13: 2510, PANG/GD: 1.0, SARS-CoV: 1670, WIV1: 2460, HKU3: 1.0

N.A.

N.A.

49

SARS-CoV-2-5-Helix

HR1-HR2-HR1-HR2-HR1-His (HR1:L922-Q965; HR2: D1165-G1204)

SARS-CoV-2: 127

WT: 243, Alpha: 363.6, Beta: 169.7, Gamma (P.1): 141.8, Delta: 368.9, Omicron: 140.7, lambda: 238.2

SARS-CoV-2: 293, Omicron: 279

N.A.

95

GL25E

GRFT-(G4S)5-EK1

SARS-CoV-2: 4.4, SARS-CoV: 30.1, MERS-CoV: 4.9, HCoV-NL63: 0.40, HCoV-229E: 0.33, HCoV-OC43: 0.27

WT: 8.7, SARS-CoV: 62.1, MERS-CoV: 0.2, HCoV-NL63: 0.5, HCoV-229E: 1.8, HCoV-OC43: 0.15

SARS-CoV-2: 29.8, HCoV-OC43: 0.2, HCoV-229E: 177.2

Intranasal application of GL25E can prevent and treat infection in mice challenged with HCoV-OC43

101

FL-EK1

FN3-Linker-EK1

SARS-CoV-2: 68.5

HCoV-OC43: 398.2

WT: 90.6, Alpha: 114.5, Beta: 201.2, Gamma (P.1): 373.1, Delta: 133.0, Omicron: 297.5, Lambda: 88.5, Eta: 179.2, Kappa: 230.9, HCoV-OC43: 1593

SARS-CoV-2: 25.3, Delta: 281.2, HCoV-OC43: 207

Intranasal application of FL-EK1 can prevent and treat infection in mice challenged with HCoV-OC43 and SARS-CoV-2 Delta variant

102

  1. WT, wild type (of SARS-CoV-2). N.D., indicates below neutralizing threshold. N.A., not application. Fd, T4 foldon