Table 2 Presence of corrin ring marker annotations in predicted cobamide biosynthesis categories
Cobamide biosynthesis category | |||||||||
|---|---|---|---|---|---|---|---|---|---|
Cobamide producers | Partial biosynthesis | Non-producers | |||||||
Very likely (n = 1016) | Likely (n = 2361) | Possible (n = 832) | All cobamide producers (n = 4209) | Tetrapyrrole precursor salvager (n = 201) | Cbi salvage (n = 1734) | Likely (n = 29) | Very likely (n = 5263) | All non-producers (n = 5292) | |
CbiL/CobI | 100.0a | 99.2 | 98.0 | 99.2 | 87.1 | 8.9 | 62.1 | 0.1 | 0.5 |
CbiF/CobM | 100.0 | 99.8 | 96.8 | 99.2 | 93.5 | 4.7 | 65.5 | 0.4 | 0.6 |
CbiC/CobH | 100.0 | 99.7 | 96.4 | 99.1 | 99.5 | 5.0 | 69.0 | 0.5 | 0.9 |
CbiL/CobI and CbiF/CobM | 100.0 | 99.0 | 94.9 | 98.4 | 80.6 | 1.3 | 37.9 | 0.0 | 0.2 |
CbiL/CobI and CbiC/CobH | 100.0 | 98.9 | 94.5 | 98.3 | 89.6 | 4.5 | 41.4 | 0.0 | 0.2 |
CbiF/CobM and CbiC/CobH | 100.0 | 99.4 | 93.4 | 98.4 | 89.6 | 8.2 | 41.4 | 0.0 | 0.3 |
CbiL/CobI and CbiF/CobM and CbiC/CobH | 100.0 | 98.6 | 91.6 | 97.6 | 76.6 | 0.5 | 24.1 | 0.0 | 0.1 |
