Fig. 1 | The ISME Journal

Fig. 1

From: Genomic and transcriptomic insights into the ecology and metabolism of benthic archaeal cosmopolitan, Thermoprofundales (MBG-D archaea)

Fig. 1

Phylogenetic tree of Thermoprofundales (a) and relative abundances of indicator lineages associated with environments (b, c). Dereplicated Thermoprofundales sequences (97% cutoff) from SILVA SSURef 128 was used to construct this RAxML-based phylogenetic tree. From the inside to the outside, the first ring denotes 25 environmental categories, the second ring denotes the salinity, and the third ring denotes the seep environment condition. Nodes with bootstrap values >75% were marked with black dots. The outgroup is the 16S rRNA gene sequence from Thermoplasma volcanium GSS1. The indicator lineages are inferred by their relative abundances and relative frequencies in all the libraries that they occur, based on statistical analysis. The significantly supported indicator lineages associated with salinity and seep conditions were used to plot the polar histogram figures depicting their abundance patterns in all the studied libraries

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