Table 2 Bayes factors for model comparisons for each antibiotic group

From: Modelling microbiome recovery after antibiotics using a stability landscape framework

Antibiotic treatment group

Gut microbiome

Oral microbiome

Ciprofloxacin

3.06

16.87

Clindamycin

10.94

7.47

Minocycline

2.11

2.42

Amoxicillin

1.51

1.31

  1. The Bayes factor (BF) allows model selection, here for model 2 (with a state transition) against model 1 (no state transition). Following Kass and Raffery, we interpret BF > 3 (values shown in bold) as positive evidence in favour of model 2 [51]