Table 2 Mutations identified by whole-genome sequencing of communities
From: Lytic bacteriophage have diverse indirect effects in a synthetic cross-feeding community
Community Type | Genetic element | Mutation location | Mutation | Gene | Identified in no. of reps |
|---|---|---|---|---|---|
ES + P22vir | S. enterica genome | Coding region (486/495bp) | Frameshift (+G) | STM2609—DNA packaging-like protein, small terminase subunit, in Gifsy-1 prophage | 4/5 |
ES + T7 | E. coli genome | Intergenic (+118/−67) | Δ5 bp:: repeat_region(+)+4 bp | clpX—lon intergenic region, upstream of lon | 1/3 |
E. coli genome | Intergenic (+90/−93) | repeat_region (+)+6 bp:: Δ1 bp | clpX—lon intergenic region, upstream of lon | 3/3 |
