Fig. 7: Phylogenetic analysis of TsdA and SoxB homologs. | The ISME Journal

Fig. 7: Phylogenetic analysis of TsdA and SoxB homologs.

From: A novel bacterial thiosulfate oxidation pathway provides a new clue about the formation of zero-valent sulfur in deep sea

Fig. 7

The consensus phylogenetic tree of TsdA (a) and SoxB (b) in E. flavus 21–3 with other homologs obtained from public bacterial genomes (accession numbers are indicated after each species name) constructed by the neighbor-joining method. Branches shown in the tree represent sequences clustered with typical TsdA or SoxB, and each color indicates a specific species in a and b. Related species containing both TsdA and SoxB and their corresponding GenBank accession numbers are listed as follows: Advenella kashmirensis: GCA_000219915.3; Methylobacterium sp. C1: GCA_001854385.1; Indioceanicola profundi: GCA_003568845.1; Thioclava nitratireducens: GCA_000024765.1; Defluviimonas alba: GCA_000024765.1; Halothiobacillus neapolitanus: GCA_000024765.1; Thioalkalivibrio versutus: GCA_001020955.1; Massilia alkalitolerans: GCA_000427785.1, and E. flavus 21–3: GCA_008932225.1.

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