Fig. 2: Analysis of the recombination pattern in the L. rhizohalophila population.
From: Divergence of a genomic island leads to the evolution of melanization in a halophyte root fungus
A Linkage disequilibrium (LD) decay between pairs of SNPs, measured as R2, with distance on the same scaffold. B Mating structure and organization of L. rhizohalophila JP-R-44 suggested its homothallic reproduction mode. sla2: cytoskeleton assembly control protein, (protein ID 13068); apn2: DNA lyase (protein ID 13428); cox13: cytochrome oxidase (protein ID 13427); apc5: amino acid-polyamine-organocation (protein ID 13426). C Phylogenetic network generated in SplitsTree of 29 L. rhizohalophila isolates. Scale bar indicates genetic distance. Branch lengths represent pairwise Hamming distances (uncorrected p distances).
