Fig. 3: Phylogenomics and comparative genomics of co-assembled MAGs from wild Atlantic salmon and closely related Mycoplasma species and candidate genomes.
From: Co-diversification of an intestinal Mycoplasma and its salmonid host
a unrooted phylogenomic maximum likelihood tree constructed based on 934 HMM hits from 71 single-copy core genes across 17 genomes and MAGs. b Heatmap of Average Nucleotide Identity (ANI) similarity among salmonid-related Mycoplasma MAGs from this study and farmed salmonids [15], and Mycoplasma MAGs related to Atlantic cod from the same environment [75]. c Heatmap of the metabolic reconstruction and comparison of salmonid-related Mycoplasma versus other fish-related Mycoplasma, based on completion of KEGG pathways.
