Table 2 CYP2D6 and CYP2C19 allele frequencies per major geographical regiona.

From: Meta-analysis of probability estimates of worldwide variation of CYP2D6 and CYP2C19

Region

 

CYP2D6*2

CYP2D6*4

CYP2D6*5

CYP2D6*10

CYP2D6*17

CYP2D6*29

CYP2D6*35

CYP2D6*41

CYP2D6*45

CYP2C19*2

CYP2C19*3

CYP2C19*17

Africa

M

0.25

0.10

0.04

0.03

0.19

0.09

0.01

0.04

0.07

0.17

0.00

0.23

n

6815

7012

6796

6711

6631

5941

181

6206

153

9140

7189

5477

SD

0.07

0.03

0.02

0.01

0.03

0.02

0.01

0.04

0.03

0.03

0.01

0.02

African Americans

M

0.20

0.08

0.04

0.04

0.19

0.06

0.00

0.03

0.03

0.18

0.00

0.22

n

3911

4057

4057

3811

3811

3647

131

3648

252

3877

3877

3533

SD

0.03

0.01

0.01

0.01

0.01

0.00

0.00

0.02

0.00

0.01

0.00

0.01

Americas

M

0.25

0.12

0.03

0.02

0.02

0.01

0.02

0.04

0.00

0.11

0.00

0.13

n

18,065

19,802

18,571

18,580

16,018

15,496

8399

16,052

528

12,261

11,155

9091

SD

0.08

0.05

0.02

0.03

0.03

0.02

0.02

0.03

0.00

0.04

0.01

0.04

Central/South East Asia

M

0.34

0.10

0.03

0.10

0.00

0.00

0.00

0.13

 

0.33

0.01

0.15

n

10,523

12,393

10,573

11,180

9797

8700

10

8822

 

14,789

13,076

10,837

SD

0.07

0.04

0.03

0.11

0.00

0.00

0.00

0.02

 

0.05

0.03

0.04

East Asia

M

0.13

0.00

0.05

0.49

0.00

0.00

0.00

0.02

 

0.30

0.07

0.02b

n

16,297

15,510

18,049

18,978

11,050

5234

3039

14,608

 

24,120

24,861

6756

SD

0.03

0.01

0.01

0.08

0.00

0.00

0.00

0.01

 

0.05

0.03

0.01

Europe

M

0.36

0.18

0.03

0.02

0.00

0.00

0.06

0.08

 

0.15

0.00

0.23

n

128,397

143,492

134,524

127,590

125,502

123,554

1040

125,303

 

180,615

130,396

170,889

SD

0.08

0.04

0.01

0.02

0.01

0.01

0.01

0.03

 

0.02

0.00

0.02

Middle East

M

0.29

0.09

0.02

0.14

0.03

0.02

 

0.25

 

0.15

0.02

0.25

n

1123

2902

1424

1816

1116

340

 

961

 

4768

3728

1903

SD

0.11

0.06

0.01

0.11

0.03

0.01

 

0.09

 

0.08

0.04

0.06

Oceania

M

0.05

0.04

0.05

0.02

0.00

0.00

 

0.02

 

0.77

0.14

0.13

n

279

361

361

361

301

62

 

122

 

5687

149

24

SD

0.04

0.05

0.03

0.02

0.00

0.00

 

0.02

 

0.09

0.15

0.00

Total

M

0.32

0.15

0.03

0.07

0.01

0.01

0.02

0.07

0.02

0.18

0.01

0.21

n

185,410

205,529

194,355

189,027

174,226

162,974

12,800

175,722

933

255,257

194,431

208,510

SD

0.11

0.06

0.02

0.15

0.05

0.02

0.02

0.04

0.03

0.11

0.03

0.05

  1. Bold = prevalence >0.05.
  2. M mean, n number of genotyped subjects, SD standard deviation.
  3. aFor references, please see Supplemental Table 1.
  4. bFor this specific region, CYP2C19*17 is not part of the minimum set of alleles for reliable phenotype prediction, because with 2% it is less prevalent than 5% in this area. This means that studies from East Asia who only determined CYP2C19*2 and *3 are included in the meta-analysis.