Table 3 nrTEs with allele p-values < 0.01.
From: Evolutionarily recent retrotransposons contribute to schizophrenia
Type | Chr. | Bp | SCZ(−) | SCZ(+) | CTRL(−) | CTRL(+) | Fisher | ITU(−) | ITU(+) | CEU(−) | CEU(+) | CHB(−) | CHB(+) | YRI(−) | YRI(+) | LWK(−) | LWK(+) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SVA-INS | 20 | 5268423 | 7 | 13 | 16 | 4 | 0,0095 | 29 | 13 | 31 | 17 | 28 | 16 | 37 | 11 | 22 | 18 |
ALU-INS | 4 | 17150918 | 11 | 9 | 20 | 0 | 0,0012 | 43 | 7 | 41 | 9 | 34 | 14 | 45 | 5 | 47 | 1 |
ALU-INS | 4 | 23511024 | 13 | 7 | 20 | 0 | 0,0083 | 33 | 3 | 33 | 7 | 28 | 6 | 20 | 14 | 34 | 6 |
ALU-INS | 11 | 40727097 | 20 | 0 | 12 | 8 | 0,0033 | 45 | 5 | 42 | 8 | 32 | 16 | 49 | 1 | 47 | 3 |
