Table 2 Bacteria found in significantly different abundance in CRC, adenomas and controls in at least two studies.

From: A systematic review of microbial markers for risk prediction of colorectal neoplasia

Bacteria taxonomic level

Reported to be more abundant in:

Phylum

Order/Famliy

Genus

Species

CRC

Adenomas

Controls

Actinobacteria

   

[24]

[35]

[31]

Bifidobacteriaceae

Bifidobacterium

   

[22, 38, 39, 48, 61, 62]

[Actinomycetaceae]

Actinomyces

 

[34, 36]

[35]

 

[Coriobacteriaceae]

Atopobium

 

[34]

[36]

 
  

Eggerthella lenta

[25, 51]

  

Bacteroidetes

   

[21, 24, 26, 48, 49]

[31, 37]

[24, 26, 37, 47]

Porphyromonadaceae

Porphyromonas

 

[22, 26, 29]

[39]

 
  

Porphyromonas asaccharolytica

[15, 25, 50, 59]

  

[Bacteroidaceae]

Bacteroides

 

[28, 29]

 

[23, 26]

  

Bacteroides fragilis

[34]

[30, 39]

[61]

[Prevotellaceae]

Prevotella

 

[28]

 

[23]

Firmicutes

   

[26, 29, 48]

[35]

[21, 24, 26, 31, 35, 37, 47]

Ruminococcaceae

Ruminococcus

 

[23, 38]

[29]

[48]

 

Faecalibacterium

Faecalibacterium prausnitzii

[43]

 

[69]

[Clostridiaceae]

Clostridium

 

[23]

[29]

 
  

Clostridium symbiosum

[52, 58, 69]

[58]

 

Streptococcaceae

Streptococcus

 

[23, 26]

[35]

[24, 48]

[Lachnospiraceae]

Coprococcus

 

[50]

[53]

[53]

 

Lactobacillus

 

[28]

 

[39]

 

Roseburia

   

[23, 26, 39]

  

Roseburia faecis

  

[25, 51]

[Enterococcaceae]

Enterococcus

 

[26, 32]

  
  

Enterococcus faecalis

[46]

[30, 77]

 

[Peptostreptococcaceae]

Peptostreptococcus

 

[22, 23, 26, 36]

  
  

Peptostreptococcus stomatis

[15, 34, 52, 59]

  

[Acidaminococcaceae]

Phascolarctobacterium

 

[29]

[35]

[38]

Fusobacteria

   

[29, 35, 38]

  

[Fusobacteriaceae]

Fusobacterium

 

[22, 23, 32, 34, 36, 50, 54, 67]

[36]

 
  

Fusobacterium nucleatum

[15, 34, 43, 52,53,54, 58, 59, 75, 79]

[30, 58, 77, 81]

 

Tenericutes

   

[26]

[35]

[35]

Alcaligenaceae

   

[22, 35]

[27]

Enterobacteriaceae

Salmonella

 

[27, 46]

 

[36]

  

Escherichia coli

[43, 49]

  

[Pseudomonadaceae]

Pseudomonas

 

[61]

[29]

 
  1. Bacteria in square brackets were not reported on this level and are there for reference.
  2. The number represents the corresponding order of the sited reference in the manuscript.