Table 3 Histone Methylation in HCC.

From: The epigenetic basis of hepatocellular carcinoma – mechanisms and potential directions for biomarkers and therapeutics

Histone methylated

Histone methyltransferase

Effect on gene transcription

Molecular mechanism

Potential implications in HCC

References

H3K27me1–3

PRC2

Repression

•Repression of miR-622 expression, leading to overexpression of CXCR4

•Repression of miR-139-5p, miR-125b, miR-101, let-7c, and miR-200b, resulting in overexpression of proto-oncogenes

•Increased tumor size

•Vascular invasion

•Reduced overall survival

•Reduced recurrence-free survival after surgery

Liu et al. [55]

Kusakabe et al. [56]

H3K4me3

SET7 / 9

Activation

•Upregulation of proto-oncogenes e.g., MYC, CTNNB1, STAT3, MYD88, ERBB3, ARHGAP5, PLCG1

•Overexpression of S1PR1, leading to upregulated AKT, STAT3, and MAPK signaling pathways

•Upregulation of CDK2 and MMP2

•HCC proliferation

•Metastasis

•Reduced overall survival

Hamamoto et al. [57]

Sarris et al. [58]

Zhang et al. [59]

Wang et al. [60]

Liu et al. [42]

H3K9me1–2

G9a

Repression

•Suppression of RARRES3

•Suppression of Bcl-G, which inhibit p53-mediated apoptosis

•HCC proliferation

•Reduced overall survival

Wei et al. [61]

Nakatsuka et al. [62]

Bárcena-Varela et al. [76]

H3K9me3

SUV39H1/2

Repression

•Suppression of CDKN2A

Expression of H3K9me3 correlate with recurrence rate and progression

Chiba et al. [77]

H4K20me1

SET8

Activation

•Upregulation of Wnt signaling pathway

•Upregulation of VEGF

•HCC proliferation

•Metastasis

•Angiogenesis

Wu et al. [63]

H3K36me3

SMYD5

Activation

•Upregulation of Ras and Wnt signaling pathways

•HCC tumorigenesis

•Reduced overall survival

Zhang et al. [64]