Table 4 Primers for PCR identified monoclonal genotype.

From: DKK1-SE recruits AP1 to activate the target gene DKK1 thereby promoting pancreatic cancer progression

Primers for PCR identified homozygous clones

Region

Primer (5′ - 3′)

Primer

Location (HG38)

Size (bp)

f1

Forward

GATGATCCTGCAGATGTCCA

chr10:52442048-52444588

2541

Reverse

TCATCATAGGTCTATGCACCAA

f2

Forward

GCTGGCTCATGCTAGCGAA

chr10:52443534-52443758

225

Reverse

TGCTATGAATCAGGCACCACA

Primers for off-target detection of CRISPR/Cas9

Region

Primer (5′ - 3′)

Primer

Location (HG38)

Size (bp)

off-target site1-1

Forward

GTGAGGAATCCGTGGATAAA

chr8:73136566-73136588

442

Reverse

GGCAGGCAGACAGTAAACAG

off-target site1-2

Forward

TCTTGATATGCTGCACAAACA

chrX:135147974-135148596

422

Reverse

AGATAGGCCACAATGACCAC

off-target site1-3

Forward

AGATAGGCCACAATGACCAC

chrX:135223948-135224570

419

Reverse

TGATATGCTGCACAAACACC

off-target site2-1

Forward

AAGGAAAAGCAAGTGAGAAG

chr20:1795603-1796225

390

Reverse

TAAAATGAGTTGGGAAGTGT

off-target site2-2

Forward

GGCACTTACAATACACCTAA

chr6:118013776-118014398

485

Reverse

AGAGCCCACCATTTCTCACA

off-target site2-3

Forward

GATTTGTTTGGAATGAGGAA

chr13:75921023-75921645

391

Reverse

TAGAAATCACCAAATAGCCT