Table 3 Gene variants detected in CRC and AT.

From: Adipose-tumor crosstalk in colorectal cancer: Identifying (Epi)genetic biomarkers for tumor progression and cachexia

Tissue type

Gene Name

cDNA Variant

CRC + Intra-VAT

HLA-C

NM_002117.6:c.538_539delinsTG

CRC + Peri-VAT

KRAS

NM_033360.4:c.38 G > A

CRC + SAT

CD79A

NM_001783.4:c.87_89inv

CRC + Intra-VAT + Peri-VAT

MET

NM_000245.4:c.3029-721dup

CRC + Intra-VAT + SAT

HLA-B

NM_005514.8:c.353_355delinsTCA

CRC + Peri-VAT + SAT

CD79A

NM_001783.4:c.95 C > G

CRC + Intra-VAT + SAT + HVAT

HLA-A

NM_002116.8:c.257_259delinsGGC

  1. The table lists the gene names and cDNA variants detected in different samples of CRC and AT. Notable findings include variants in HLA-C, KRAS and CD79A, specific between CRC and various types of AT. MET, HLA-B, CD79A variants are shared between CRC and two types of AT. HLA-A variant is shared between CRC and three types of AT.
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