Table 1 Top 15 genes with the negative correlation of DNA methylation and mRNA expression between NOA and OA

From: Novel biomarker ZCCHC13 revealed by integrating DNA methylation and mRNA expression data in non-obstructive azoospermia

Probe name

Gene symbol

Gene ID

Reference accession

Region

ρ value

P value methylation

Q value methylation

Δβ value (NOA/OA)

Fold change (NOA/OA)

cg07085664

CHRNB3

1142

NM_000749

Body

−0.757

0.048

0.124

0.442

0.429

cg07421329

EFHA2

286097

NM_181723

Body

−0.757

0.048

0.124

−0.345

6.455

cg02134046

SPERT

220082

NM_152719

3′-UTR

−0.786

0.034

0.100

0.413

0.002

cg13823366

FBXO39

162517

NM_153230

TSS1500

−0.786

0.034

0.100

0.387

0.003

cg00601486

H1FNT

341567

NM_181788

1st Exon

−0.786

0.034

0.100

0.504

0.005

cg24153003

OAZ3

51686

NM_001134939

Body

−0.786

0.034

0.100

0.213

0.005

cg27623334

CXorf61

203413

NM_001017978

TSS200

−0.786

0.034

0.100

0.544

0.006

cg13513349

ADAM29

11086

NM_001130704

5′-UTR

−0.786

0.034

0.100

0.445

0.007

cg15822411

CCDC83

220047

NM_173556

1st Exon

−0.786

0.034

0.100

0.310

0.009

cg09848324

PDCL2

132954

NM_152401

Body

−0.786

0.034

0.100

0.514

0.009

cg26647524

KBTBD5

131377

NM_152393

TSS200

−0.786

0.034

0.100

0.418

0.010

cg23478805

ZCCHC13

389874

NM_203303

TSS200

0.786

0.034

0.100

0.572

0.010

cg22806002

BTG4

54766

NM_017589

TSS200

−0.786

0.034

0.100

0.218

0.011

cg04864648

PDHA2

5161

NM_005390

TSS200

−0.786

0.034

0.100

0.492

0.012

cg24803912

POU5F2

134187

NM_153216

TSS200

−0.786

0.034

0.100

0.465

0.012

  1. NOA non-obstructive azoospermia, OA obstructive azoospermia
  2. Bold values indicated that DNA methylation and mRNA expression of ZCCHC13 was highly anticorrelated and was ranked very top