Fig. 5: The performance of NanoStrand-seq in detecting and phasing SVs. | Cell Discovery

Fig. 5: The performance of NanoStrand-seq in detecting and phasing SVs.

From: Simultaneous de novo calling and phasing of genetic variants at chromosome-scale using NanoStrand-seq

Fig. 5: The performance of NanoStrand-seq in detecting and phasing SVs.

a Length distribution of deletion (left) and insertion (right) events. b Venn diagram illustrating the consistency of SVs between NanoStrand-seq, bulk PB-CCS, and bulk ONT-UL. c The number of SVs derived from NanoStrand-seq. d The consistency of phased hetSVs between NanoStrand-seq and PB-CCS data. The parental information was annotated by GIAB. e The pie charts showing the proportion of SVs that contained repetitive elements (left) and the type of repetitive elements (right). f The distance distribution of haplotype-resolved SVs to its nearest hetSNPs. The schematic diagram on the left depicts a hypothetical situation.

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