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Substrate-selective nanofactories constructed from enzyme-loaded thermoresponsive peptoid-b-oligosaccharide vesicles

Abstract

Nanofactories are artificial vesicles that create protected, microscopic reaction environments for encapsulated enzymes. The nanostructure of the vesicles shields the internal enzymes while allowing small substrates to permeate the membranes for catalytic reactions. A key challenge in the synthesis of nanofactories is achieving efficient enzyme encapsulation. Here, we constructed self-assembled vesicles from a thermoresponsive peptoid-based block copolymer, which achieved a high enzyme encapsulation efficiency of more than 50%. In contrast, conventional methods typically yield efficiencies of only a few percent. We hypothesized that this high performance stems from a temperature-induced coacervate-to-vesicle phase transition, where enzymes are first partitioned into a polymer-rich coacervate phase before being entrapped within vesicles upon heating. The resulting enzyme-loaded vesicles acted as robust nanoreactors, shielding enzymes from external proteases, while exhibiting selective permeability that enabled substrate sorting on the basis of physicochemical properties. This highly efficient encapsulation strategy, leveraging the phase transition of biocompatible materials, resolves a long-standing bottleneck in nanoreactor development. Such advanced nanoreactors could pave the way for novel biomedical applications, including in vivo therapeutic synthesis and the construction of sophisticated artificial organelles.

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Acknowledgements

This study was financially supported by the Japan Society for the Promotion of Science through grants-in-aid for scientific research (grant numbers 23K13803, 23KK0204, and 23H03750), the Kansai University Research Branding Project 2022-2025, and the Kansai University Fund for Supporting Young Scholars. The SAXS experiments were conducted using the BL19B2 and BL40B2 beamlines of SPring-8 under proposal numbers 2025A1966 and 2025A1078, respectively. The Cryo-TEM experiment was supported by the “ARIM Project of the Ministry of Education, Culture, Sports, Science and Technology, Japan (MEXT), Grant No. JPMXP1225OS0049” at the Research Center for Ultra-High Voltage Electron Microscopy (Nanotechnology Open Facilities) at Osaka University.

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YO contributed to conceptualization, methodology, formal analysis, methodology, writing—first draft, review and editing, funding acquisition, project administration, and visualization. TN contributed to the methodology, data curation, conceptualization, writing—review and editing. YI contributed to writing—review and editing and funding acquisition. YS contributed to writing—review and editing. KA contributed to the methodology, supervision and writing—review and editing.

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Correspondence to Yota Okuno.

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Okuno, Y., Nishimura, T., Iwasaki, Y. et al. Substrate-selective nanofactories constructed from enzyme-loaded thermoresponsive peptoid-b-oligosaccharide vesicles. Polym J (2025). https://doi.org/10.1038/s41428-025-01116-7

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