Abstract
Epilepsy is one of the most common neurological diseases and it causes profound morbidity and mortality. We identified the first de novo variant in KCNMA1 (c.2984 A > G (p.(N995S)))—encoding the BK channel—that causes epilepsy, but not paroxysmal dyskinesia, in two independent families. The c.2984 A > G (p.(N995S)) variant markedly increased the macroscopic potassium current by increasing both the channel open probability and channel open dwell time. The c.2984 A > G (p.(N995S)) variant did not affect the calcium sensitivity of the channel. We also identified three other variants of unknown significance (c.1554 G > T (p.(K518N)), c.1967A > C (p.(E656A)), and c.3476 A > G (p.(N1159S))) in three separate patients with divergent epileptic phenotypes. However, these variants did not affect the BK potassium current, and are therefore unlikely to be disease-causing. These results demonstrate that BK channel variants can cause epilepsy without paroxysmal dyskinesia. The underlying molecular mechanism can be increased activation of the BK channel by increased sensitivity to the voltage-dependent activation without affecting the sensitivity to the calcium-dependent activation. Our data suggest that the BK channel may represent a drug target for the treatment of epilepsy. Our data highlight the importance of functional electrophysiological studies of BK channel variants in distinguishing whether a genomic variant of unknown significance is a disease-causing variant or a benign variant.
Similar content being viewed by others
Log in or create a free account to read this content
Gain free access to this article, as well as selected content from this journal and more on nature.com
or
References
Orsini A, Zara F, Striano P. Recent advances in epilepsy genetics. Neurosci Lett. 2017;pii: S0304-3940(17)30402-0.
Sands TT, Choi H. Genetic testing in pediatric epilepsy. Curr Neurol Neurosci Rep. 2017;17:45.
Du W, Bautista JF, Yang H, et al. Calcium-sensitive potassium channelopathy in human epilepsy and paroxysmal movement disorder. Nat Genet. 2005;37:733–8.
Wang C, Wu M, Qian J, et al. Identification of rare variants in TNNI3 with atrial fibrillation in a Chinese GeneID population. Mol Genet Genome. 2016;291:79–92.
Xu C, Yang Q, Xiong H, et al. Candidate pathway-based genome-wide association studies identify novel associations of genomic variants in the complement system associated with coronary artery disease. Circ Cardiovasc Genet. 2014;7:887–94.
Wang P, Yang Q, Wu X, et al. Functional dominant-negative mutation of sodium channel subunit gene SCN3B associated with atrial fibrillation in a Chinese GeneID population. Biochem Biophys Res Commun. 2010;398:98–104.
Huang Y, Wang Z, Liu Y, et al. alphaB-Crystallin Interacts with Nav1.5 and Regulates Ubiquitination and Internalization of Cell Surface Nav1.5. J Biol Chem. 2016;291:11030–41.
Hou P, Zeng W, Gan G, et al. Inter-alpha/beta subunits coupling mediating pre-inactivation and augmented activation of BKCa(beta2). Sci Rep. 2013;3:1666.
Cui J, Aldrich RW. Allosteric linkage between voltage and Ca(2+)-dependent activation of BK-type mslo1 K(+) channels. Biochemistry. 2000;39:15612–9.
Wu L, Yong SL, Fan C, et al. Identification of a new co-factor, MOG1, required for the full function of cardiac sodium channel Nav 1.5. J Biol Chem. 2008;283:6968–78.
Yang J, Krishnamoorthy G, Saxena A, et al. An epilepsy/dyskinesia-associated mutation enhances BK channel activation by potentiating Ca2+ sensing. Neuron. 2010;66:871–83.
Zhou Y, Lingle CJ. Paxilline inhibits BK channels by an almost exclusively closed-channel block mechanism. J General Physiol. 2014;144:415–40.
Brenner R, Chen QH, Vilaythong A, Toney GM, Noebels JL, Aldrich RW. BK channel beta4 subunit reduces dentate gyrus excitability and protects against temporal lobe seizures. Nat Neurosci. 2005;8:1752–9.
Meera P, Wallner M, Toro L. A neuronal beta subunit (KCNMB4) makes the large conductance, voltage- and Ca2+-activated K+ channel resistant to charybdotoxin and iberiotoxin. Proc Natl Acad Sci USA. 2000;97:5562–7.
Wolff M, Johannesen KM, Hedrich U, et al. Genetic and phenotypic heterogeneity suggest therapeutic implications in SCN2A-related disorders. Brain. 2017;140:1316–36.
Vu V, Verster AJ, Schertzberg M, et al. Natural variation in gene expression modulates the severity of mutant phenotypes. Cell. 2015;162:391–402.
Lee CY, Chen CC, Liou HH. Levetiracetam inhibits glutamate transmission through presynaptic P/Q-type calcium channels on the granule cells of the dentate gyrus. Br J Pharmacol. 2009;158:1753–62.
Nagarkatti N, Deshpande LS, DeLorenzo RJ. Levetiracetam inhibits both ryanodine and IP3 receptor activated calcium induced calcium release in hippocampal neurons in culture. Neurosci Lett. 2008;436:289–93.
Niespodziany I, Klitgaard H, Margineanu DG. Levetiracetam inhibits the high-voltage-activated Ca(2+) current in pyramidal neurones of rat hippocampal slices. Neurosci Lett. 2001;306:5–8.
Sheehan JJ, Benedetti BL, Barth AL. Anticonvulsant effects of the BK-channel antagonist paxilline. Epilepsia. 2009;50:711–20.
Wu Y, Yang Y, Ye S, Jiang Y. Structure of the gating ring from the human large-conductance Ca(2+)-gated K(+) channel. Nature. 2010;466:393–7.
Yuan P, Leonetti MD, Pico AR, Hsiung Y, MacKinnon R. Structure of the human BK channel Ca2+-activation apparatus at 3.0 A resolution. Science. 2010;329:182–6.
Acknowledgements
We are grateful to Dr. Johannes Lemke for help and assistance and Dr. Jiuping Ding for the gift of the expression construct for KCNMA1 and KCNMB4. We thank Chengcheng Tan and Hongbo Xiong for help and assistance. This work was supported by the China National Natural Science Foundation grants (31430047, 81630002, and 91439129), 2016 Top-Notch Innovative Talent Development Project from the Bureau of Human Resources, and Social Security of Wuhan City, Chinese National Basic Research Programs (973 Programs 2013CB531101), Hubei Province Natural Science Key Program (2014CFA074), and NIH/NHLBI grants R01 HL121358 and R01 HL126729.
Author information
Authors and Affiliations
Corresponding authors
Ethics declarations
Conflict of interest
The authors declare that they have no conflict of interest.
Additional information
Publisher's note: Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Xia Li, Sibylle Poschmann, Qiuyun Chen, and Walid Fazeli contributed equally to this work.
Electronic supplementary material
Rights and permissions
About this article
Cite this article
Li, X., Poschmann, S., Chen, Q. et al. De novo BK channel variant causes epilepsy by affecting voltage gating but not Ca2+ sensitivity. Eur J Hum Genet 26, 220–229 (2018). https://doi.org/10.1038/s41431-017-0073-3
Received:
Revised:
Accepted:
Published:
Version of record:
Issue date:
DOI: https://doi.org/10.1038/s41431-017-0073-3
This article is cited by
-
Epigenetics of the far northern Yakutian population
Clinical Epigenetics (2023)
-
Sub-region analysis of DMD gene in cases with idiopathic generalized epilepsy
neurogenetics (2023)
-
Customized multigene panels in epilepsy: the best things come in small packages
neurogenetics (2020)


