Table 1 CNVs detected upon ES reanalysis.

From: Pathogenic cryptic variants detectable through exome data reanalysis significantly increase the diagnostic yield in Joubert syndrome

Family

Gene

Heterozygous coding variant

Second hit - CNV

ACMG – ClinGen CNV classification

COR62

KIAA0586

c.428del (p.Arg143LysfsTer4)

exon8_10 del

Likely pathogenic (1A-0; 2E-0.9; 3A-0)

COR164

KIAA0586

c.428del (p.Arg143LysfsTer4)

exon8_10 del

Likely pathogenic (1A-0; 2E-0.9; 3A-0)

COR93

KIAA0586

c.428del (p.Arg143LysfsTer4)

exon8_10 del

Likely pathogenic (1A-0; 2E-0.9; 3A-0)

COR130

KIAA0586

c.428del (p.Arg143LysfsTer4)

exon8_10 del

Likely pathogenic (1A-0; 2E-0.9; 3A-0)

COR127

AHI1

c.1500 C > G (p.Tyr500Ter)

exon18_20 del

Likely pathogenic (1A-0; 2E-0.9; 3A-0)

COR508

CPLANE1

c.3676 C > T (p.Arg1226Ter)

exon17_49 dup

Likely pathogenic (1A-0; 2I-0.9; 3A-0)