Table 2 Exome sequencing (ES) nondiagnostic cases

From: Molecular autopsy by trio exome sequencing (ES) and postmortem examination in fetuses and neonates with prenatally identified structural anomalies

Proband ID

Prenatal USS findings

PM findings

Phenotype classification based upon USS and PM

1

NT measurement 4.0 mm, arthrogryposis

Skin webs, flexed contractures, severe bilateral talipes, webbed neck, micrognathia, reduced muscle bulk, subcutaneous edema

FADS

2

Asymmetrical ventriculomegaly (displacement of the midline), irregularity of the ventricular lining (possibly neuronal heterotopias), possibly absent corpus callosum, abnormal posterior fossa, single outlet to the heart, VSD

Large cranial vault, TOF, persistent left SVC, right-sided aortic arch, absent right umbilical artery, abnormally shaped thymus, severe dysplasia of the cerebellum with obliteration of the 4th ventricle, malformed brainstem and midbrain, atresia of aqueduct of Sylvius and 4th ventricle, enlarged right cerebral hemisphere, probable arachnoid cyst between hemispheres, abnormal deep white matter bundles in cerebral hemispheres

Multisystem

4

Short long bones and talipes

Small size, facial dysmorphia, prominent occiput, bilateral talipes, rhizomelic shortening of the limbs, wide-set nipples, osteopenic bones, horizontal ribs

Skeletal

5

Hydrops fetalis

Facial dysmorphia, nuchal edema, dilated left atrium and left ventricle, cardiomegaly, valvular aortic atresia

Cardiac

6

Small left ventricle, bilateral superior vena cavas, levocardia with significant ventricular imbalance, small slit-like left ventricle with some mitral inflow, perimembranous VSD, normal large vessels, HLHS Ebstein-type abnormality, DORV, abnormal left kidney

Overlapping fingers, bilateral talipes, dysmorphic ears, skin webbed neck, cardiomegaly, pulmonary stenosis with dysplastic valves, VSD, right ventricular pouch, persistent left SVC, small testis/thymus, ectopic left kidney

Multisystem

7

Polyhydramnios, micrognathia, right-side mild dilatation of the renal pelvis

Facial dysmorphia, hypoplastic lungs, CPAM-0, small gall bladder, small right kidney with dilated renal pelvis, simple renal cysts bilaterally, gracile bones (especially the clavicles, fracture of the right clavicle), excess of extramedullary hematopoiesis in the liver

Multisystem

12

Exomphalos, borderline ventriculomegaly

Omphalocele, bilateral talipes

Abdominal

13

Bilateral multicystic, dysplastic kidneys

Facial dysmorphia, pterygium of the neck, contractures of the upper limbs, bilateral talipes, transverse palmar creases, bilateral cystic–dysplastic kidneys, lung hypoplasia

Genitourinary

14

Growth restriction <10th centile

Retrognathia, ASD (secundum type), small thymus, lung petechiae, distended bladder with retained urine (no evidence of obstruction)

Cardiac

15

Unilateral ventriculomegaly

Macrocephaly, partly compressed skull, overlapping cranial bones, loose scalp, anteverted nares, small heart

Brain

17

Normal

Micrognathia, omphalocele, bilateral talipes, bilaterally three lobed lungs, irregularly shaped left kidney, cervical ribs

Multisystem

18

Long narrow chest, heart in unusual orientation, single multicystic dysplastic kidney, unilateral talipes, umbilical vein varix, minimal liquor

Facial dysmorphia, left-side talipes, caudal orientation of the heart, aortic valve dysplasia, rectal atresia, multicystic/aplastic renal dysplasia, lumbar and sacral vertebrae defects

Multisystem

19

Oligohydramnios, unilateral talipes,?absent bladder and kidneys, IUGR

Potter syndrome, bilateral talipes, malpositioned anus, transverse palmar creases (right hand), epicanthus, renal agenesis, unicornuate uterus, lung hypoplasia, irregularities of the sacrum vertebrae

Multisystem

20

Normal

Unilateral talipes, complete AV channel, DORV, pulmonary stenosis, symmetrical liver, absent gall bladder, right type isomerism of the lungs, auricles, absent spleen, right-sided stomach

Multisystem

23

Polyhydramnios

Abnormal posture of limbs (flexed legs in the hip and pointy feet), ulnar deviation of the hands and flexed thumbs, thin neck and diaphragm, lung hypoplasia, thin ribs, Arnold–Chiari type II (no cerebellar hypoplasia or spina bifida)

Brain

26

Congenital bladder neck obstruction

Subcutaneous edema, scoliosis, talipes and skeletal abnormalities, distended abdominal wall, anal atresia, abnormal genitalia, bladder neck obstruction with cystic bladder, rectal–vesical fistula, small lungs, small kidneys and adrenals, cystic–dysplastic change in kidneys associated to LUTO

Multisystem

27

HLHS

HLHS, 11 pairs of ribs, low-set eyes

Cardiac

  1. ASD atrial septal defect, AV atrioventricular, CPAM congenital pulmonary airway malformation, DORV double outlet right ventricle, FADS fetal akinesia deformation sequence, HLHS hypoplastic left heart syndrome, IUGR intrauterine growth restriction, LUTO lower urinary tract obstruction, NT nuchal translucency, PM postmortem, SVC superior vena cava, TOF tetralogy of Fallot, USS ultrasound scan, VSD ventricular septal defect.