Table 3 Reference case results: total costs and outcomes of ES/GS at various tiers versus standard testing.

From: Cost-effectiveness of genome-wide sequencing for unexplained developmental disabilities and multiple congenital anomalies

 

ES after standard testinga

ES as 2nd tier (after CMA alone)

ES alone as 1st tier

ES + CMA as 1st tier

GS after standard testing

GS as 1st tier

Standard testing

Total cost per patient, $b

12,041 (5517–34,491)

6357 (6179–6520)

6755 (6597–6907)

6985 (6851–7116)

12,958 (6425–35,444)

7811 (7533–8092)

8783 (2309–31,123)

• Cost of genome-wide sequencing, $

3077

4120

4590

4590

4003

6240

0

• Cost of other genetic tests, $

7116

780

769

1114

7116

290

7116

• Cost of genetic services, $

884

500

442

328

873

327

682

• Cost of nongenetic tests, $

964

957

954

954

965

954

985

Number of molecular diagnoses (per 1000 persons tested)b

399 (342–462)

413 (354–475)

429 (331–536)

466 (357–584)

382 (302–462)

460 (352–570)

185 (119–267)

Number of positive findings (per 1000 persons tested)b

431 (375–492)

457 (393–521)

473 (378–578)

515 (404–636)

412 (333–491)

509 (398–617)

185 (119–267)

Number of active treatment changes (per 1000 persons tested)b

72 (45–105)

77 (48–112)

80 (48–122)

87 (51–133)

69 (43–103)

86 (51–131)

31 (17–51)

  1. Costs in 2019 Canadian dollars. CMA chromosomal microarray, ES exome sequencing, GS genome sequencing.
  2. aCurrent pathway in Ontario.
  3. bValues presented are the mean and the 95% credible interval.