Table 2 Summary results for BOTTLENECK method
Pop # | ID | Mean HE | Sign test (p-value)* | 2-Tail Wilcoxon test (p-value)* | Loci with HE deficiency = HE excess | Interpretation | ||||
|---|---|---|---|---|---|---|---|---|---|---|
IAM | TPM | SMM | IAM | TMP | SMM | |||||
1 | sgSPad | 0.470 | 0.256 | 0.013 | 0.013 | 0.922 | 0.010 | 0.005 | Def > Exc | Expansion |
2 | sgSPar | 0.486 | 0.499 | 0.192 | 0.188 | 1.000 | 0.322 | 0.232 | Def = Exc | No change |
3 | sgSP | 0.504 | 0.077 | 0.087 | 0.086 | 0.131 | 0.557 | 0.492 | Def = Exc | No change |
4 | mzSP | 0.403 | 0.607 | 0.240 | 0.224 | 0.625 | 0.193 | 0.160 | Def = Exc | No change |
5 | mzSPj | 0.501 | 0.270 | 0.016 | 0.015 | 0.492 | 0.032 | 0.024 | Def > Exc | Expansion |
6 | sgMG | 0.481 | 0.013 | 0.087 | 0.087 | 0.010 | 0.557 | 0.557 | Def < Exc | Bottleneck |
7 | mzMG | 0.488 | 0.485 | 0.017 | 0.016 | 1.000 | 0.014 | 0.010 | Def > Exc | Expansion |
8 | soMG | 0.404 | 0.286 | 0.076 | 0.072 | 0.322 | 0.024 | 0.019 | Def > Exc | No change |
9 | sgGO | 0.490 | 0.528 | 0.215 | 0.074 | 0.625 | 0.232 | 0.131 | Def = Exc | No change |
10 | mzGO | 0.418 | 0.273 | 0.019 | 0.018 | 0.492 | 0.010 | 0.010 | Def > Exc | Expansion |
11 | mzMS | 0.471 | 0.502 | 0.066 | 0.061 | 1.000 | 0.024 | 0.019 | Def > Exc | No change |
12 | mzMTpl | 0.534 | 0.540 | 0.002 | 0.002 | 0.770 | 0.024 | 0.019 | Def > Exc | Expansion |
13 | mzMTple | 0.541 | 0.102 | 0.177 | 0.199 | 0.037 | 0.301 | 0.359 | Def = Exc | No change |
14 | mzMTsr | 0.376 | 0.182 | 0.240 | 0.228 | 0.250 | 0.074 | 0.074 | Def = Exc | No change |
15 | mzMTca | 0.452 | 0.239 | 0.224 | 0.083 | 0.770 | 0.232 | 0.131 | Def = Exc | No change |
16 | mzPR | 0.444 | 0.509 | 0.002 | 0.002 | 0.846 | 0.014 | 0.010 | Def > Exc | Expansion |
17 | mzRS | 0.436 | 0.585 | 0.045 | 0.043 | 1.000 | 0.027 | 0.020 | Def > Exc | Expansion |
18 | k1 | 0.469 | 0.020 | 0.002 | 0.002 | 0.105 | 0.002 | 0.002 | Def > Exc | Expansion |
19 | k2 | 0.503 | 0.486 | 0.016 | 0.017 | 0.770 | 0.024 | 0.019 | Def > Exc | Expansion |
20 | k3 | 0.513 | 0.452 | 0.014 | 0.014 | 0.846 | 0.005 | 0.005 | Def > Exc | Expansion |