Table 2 Summary results for BOTTLENECK method

From: Influence of historical land use and modern agricultural expansion on the spatial and ecological divergence of sugarcane borer, Diatraea saccharalis (Lepidoptera: Crambidae) in Brazil

Pop #

ID

Mean HE

Sign test (p-value)*

2-Tail Wilcoxon test (p-value)*

Loci with HE deficiency = HE excess

Interpretation

   

IAM

TPM

SMM

IAM

TMP

SMM

  

1

sgSPad

0.470

0.256

0.013

0.013

0.922

0.010

0.005

Def>Exc

Expansion

2

sgSPar

0.486

0.499

0.192

0.188

1.000

0.322

0.232

Def = Exc

No change

3

sgSP

0.504

0.077

0.087

0.086

0.131

0.557

0.492

Def = Exc

No change

4

mzSP

0.403

0.607

0.240

0.224

0.625

0.193

0.160

Def = Exc

No change

5

mzSPj

0.501

0.270

0.016

0.015

0.492

0.032

0.024

Def>Exc

Expansion

6

sgMG

0.481

0.013

0.087

0.087

0.010

0.557

0.557

Def<Exc

Bottleneck

7

mzMG

0.488

0.485

0.017

0.016

1.000

0.014

0.010

Def>Exc

Expansion

8

soMG

0.404

0.286

0.076

0.072

0.322

0.024

0.019

Def>Exc

No change

9

sgGO

0.490

0.528

0.215

0.074

0.625

0.232

0.131

Def = Exc

No change

10

mzGO

0.418

0.273

0.019

0.018

0.492

0.010

0.010

Def>Exc

Expansion

11

mzMS

0.471

0.502

0.066

0.061

1.000

0.024

0.019

Def>Exc

No change

12

mzMTpl

0.534

0.540

0.002

0.002

0.770

0.024

0.019

Def>Exc

Expansion

13

mzMTple

0.541

0.102

0.177

0.199

0.037

0.301

0.359

Def = Exc

No change

14

mzMTsr

0.376

0.182

0.240

0.228

0.250

0.074

0.074

Def = Exc

No change

15

mzMTca

0.452

0.239

0.224

0.083

0.770

0.232

0.131

Def = Exc

No change

16

mzPR

0.444

0.509

0.002

0.002

0.846

0.014

0.010

Def>Exc

Expansion

17

mzRS

0.436

0.585

0.045

0.043

1.000

0.027

0.020

Def>Exc

Expansion

18

k1

0.469

0.020

0.002

0.002

0.105

0.002

0.002

Def>Exc

Expansion

19

k2

0.503

0.486

0.016

0.017

0.770

0.024

0.019

Def>Exc

Expansion

20

k3

0.513

0.452

0.014

0.014

0.846

0.005

0.005

Def>Exc

Expansion

  1. *Probability associated with the hypothesis test: expected vs. observed number of loci with heterozygosity excess (or deficiency)
  2. Estimated mean H E and the p-values for each mutation model of two statistical test for population bottleneck
  3. Italic represents the populations that BOTTLENECK identified an "Expansion" and bold represents the ones that it identified a "Bottleneck" for one of the two moment-based tests