Table 2 Average coincidence of the best 300 predicted single crosses and its standard deviation, assuming single crosses from selected DH lines, 30 and 10% of assessed single crosses, two traits, two sampling processes of single crosses, four statistical models, three DH line sampling processes, two genetic models, and three parametric coincidence of assessed single crosses
From: Efficiency of genomic prediction of non-assessed single crosses
Trait | Samp. | Statistical | DH | Gen. | Coincidence of assessed single crosses | ||
|---|---|---|---|---|---|---|---|
Proc. | Model | Lines | Mod. | 0.26 | 0.48 | 1.00 | |
GY | SCs | Viana et al. | 1/S0 | AD | 0.4523 ± 0.0334 | 0.5525 ± 0.0190 | 0.6037 ± 0.0170 |
A | 0.4396 ± 0.0346 | 0.5449 ± 0.0176 | 0.5976 ± 0.0172 | ||||
1–5/S0 | AD | 0.5686 ± 0.0273 | 0.6369 ± 0.0221 | 0.6842 ± 0.0140 | |||
A | 0.5640 ± 0.0283 | 0.6299 ± 0.0221 | 0.6816 ± 0.0152 | ||||
1–5/S3 | AD | 0.5129 ± 0.0235 | 0.6044 ± 0.0200 | 0.7363 ± 0.0183 | |||
A | 0.5063 ± 0.0225 | 0.5993 ± 0.0193 | 0.7305 ± 0.0190 | ||||
1–5/S3 | ADa | 0.4881 ± 0.0278 | 0.5691 ± 0.0229 | 0.6620 ± 0.0215 | |||
1–5/S3 | ADb | 0.3805 ± 0.0511 | 0.4797 ± 0.0354 | 0.6087 ± 0.0233 | |||
1/S0 | ADc | 0.5528 ± 0.0298 | 0.6489 ± 0.0203 | 0.7571 ± 0.0162 | |||
1–5/S3 | ADd | 0.6116 ± 0.0214 | 0.7156 ± 0.0150 | 0.7581 ± 0.0166 | |||
Massman et al.e | 1/S0 | AD | 0.4670 ± 0.0346 | 0.5663 ± 0.0174 | 0.6157 ± 0.0157 | ||
1–5/S0 | AD | 0.5651 ± 0.0310 | 0.6431 ± 0.0164 | 0.6955 ± 0.0144 | |||
1–5/S3 | AD | 0.5279 ± 0.0291 | 0.6139 ± 0.0204 | 0.7423 ± 0.0172 | |||
GBLUP | 1/S0 | AD | 0.4622 ± 0.0308 | 0.5660 ± 0.0190 | 0.6092 ± 0.0163 | ||
1–5/S0 | AD | 0.5650 ± 0.0280 | 0.6384 ± 0.0204 | 0.6849 ± 0.0137 | |||
1–5/S3 | AD | 0.5010 ± 0.0245 | 0.5937 ± 0.0216 | 0.7294 ± 0.0168 | |||
BLUP | 1/S0 | AD | 0.4641 ± 0.0331 | 0.5709 ± 0.0176 | 0.6081 ± 0.0127 | ||
1–5/S0 | AD | 0.5531 ± 0.0323 | 0.6272 ± 0.0194 | 0.6699 ± 0.0130 | |||
1–5/S3 | AD | 0.4172 ± 0.0258 | 0.4731 ± 0.0211 | 0.5377 ± 0.0196 | |||
DHs | Viana et al. | 1/S0 | AD | 0.2753 ± 0.0374 | 0.3056 ± 0.0445 | 0.3169 ± 0.0401 | |
1–5/S0 | AD | 0.3268 ± 0.0642 | 0.3400 ± 0.0691 | 0.3461 ± 0.0728 | |||
1–5/S3 | AD | 0.3699 ± 0.0583 | 0.3931 ± 0.0579 | 0.4300 ± 0.0633 | |||
EV | SCs | Viana et al. | 1/S0 | AD | 0.5156 ± 0.0331 | 0.6081 ± 0.0159 | 0.6599 ± 0.0146 |
1–5/S0 | AD | 0.5506 ± 0.0285 | 0.6337 ± 0.0203 | 0.6944 ± 0.0141 | |||
1–5/S3 | AD | 0.4746 ± 0.0294 | 0.5843 ± 0.0174 | 0.7141 ± 0.0171 | |||