Table 1 The identified metabolites for the five traits from LASSO method in the whole population
From: Metabolome-wide association studies for agronomic traits of rice
Trait | Metabolite | LASSO | LASSO(Q)a | Heritabilityb | Name | Category |
|---|---|---|---|---|---|---|
YD | Mr1201 | 0.05 | 0.04 | 0.84 | Cyanidin 3-O-glucoside | Anthocyanin |
Mr1336 | 0.01 | 0.01 | 0.59 | L-Arginine | Amino acid | |
Mr1679 | 0.001 | 0.001 | 0.68 | —c | — | |
HD | Mr1270 | 0.04 | 0.04 | 0.34 | N-Feruloylserotonin | Phoyphenol |
Mr1389 | 0.06 | 0.05 | 0.80 | — | — | |
Mr1531 | 0.06 | 0.05 | 0.48 | Phellodenol H | Phoyphenol | |
Mr1554 | 0.02 | 0.02 | 0.41 | — | — | |
Mr1584 | 0.03 | 0.02 | 0.52 | — | — | |
PH | Mr1004 | 0.05 | 0.04 | 0.27 | N-Caffeoylputrescine | Phenolamine |
Mr1192 | 0.02 | 0.01 | 0.27 | Thiamin | Vitamine | |
Mr1270 | 0.06 | 0.05 | 0.34 | N-Feruloylserotonin | Phoyphenol | |
Mr1360 | 0.01 | 0.01 | 0.00 | — | — | |
Mr1363 | 0.05 | 0.06 | 0.30 | — | — | |
Mr1472 | 0.03 | 0.05 | 0.02 | — | — | |
Mr1525 | 0.04 | 0.04 | 0.59 | 4,6-Dihydroxyquinoline O-hexoside | Amino acid derivative | |
Mr1565 | 0.05 | 0.05 | 0.63 | — | — | |
Mr1838 | 0.03 | 0.04 | 0.28 | — | — | |
Mr1968 | 0.05 | 0.05 | 0.55 | — | — | |
GL | Mr1904 | 0.04 | 0.04 | 0.42 | — | — |
GW | Mr1136 | 0.01 | 0.01 | 0.73 | — | — |
Mr1183 | 0.03 | 0.08 | 0.80 | 4-O-p-Coumaroylqionic acid | Ployphenol | |
Mr1188 | 0.003 | 0.01 | 0.47 | Trigonelline | Alkaloid | |
Mr1330 | 0.14 | 0.05 | 0.41 | L-Lysine | Amino acid | |
Mr1702 | 0.04 | 0.09 | 0.37 | — | — | |
Mr1930 | 0.14 | 0.05 | 0.26 | — | — | |
Mr1993 | 0.05 | 0.03 | 0.45 | — | — |
