Table 5 Number of times that a population trend was incorrectly identified as declining out of 100 replicate runs for LD-based analysis in NeEstimator under a stable population model (λ = 1.0)
From: Estimation of contemporary effective population size and population declines using RAD sequence data
t 0–t 5 | t 0–t 10 | t 0–t 15 | t 0–t 20 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
(&P crit level) | (&P crit level) | (&P crit level) | (&P crit level) | ||||||||||
0.01 | 0.02 | 0.05 | 0.01 | 0.02 | 0.05 | 0.01 | 0.02 | 0.05 | 0.01 | 0.02 | 0.05 | ||
N = 250 | n = 15 | 26 | 26 | 38 | 24 | 24 | 29 | 24 | 24 | 24 | 20 | 20 | 10 |
n = 30 | 29 | 27 | 25 | 20 | 13 | 12 | 15 | 9 | 8 | 3 | 1 | 1 | |
n = 60 | 8 | 9 | 8 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | |
N = 500 | n = 15 | 1 | 1 | 38 | 0 | 0 | 32 | 2 | 2 | 29 | 3 | 3 | 23 |
n = 30 | 47 | 41 | 43 | 36 | 21 | 22 | 29 | 16 | 15 | 20 | 8 | 8 | |
n = 60 | 26 | 24 | 27 | 6 | 6 | 6 | 1 | 1 | 1 | 0 | 0 | 0 | |
N = 1000 | n = 15 | 1 | 1 | 20 | 0 | 0 | 12 | 0 | 0 | 10 | 0 | 0 | 9 |
n = 30 | 16 | 36 | 37 | 11 | 30 | 28 | 16 | 27 | 27 | 7 | 18 | 18 | |
n = 60 | 21 | 18 | 25 | 14 | 13 | 12 | 4 | 4 | 4 | 1 | 1 | 0 | |
