Table 5 Average predictive abilities of four methods for predicting 24,973 transcripts and pair-wise comparisons of the numbers of higher predicted expressions between methods

From: Genomic selection using principal component regression

Method

Predictive ability

>PCR-CV

>PLSR-CV

>BLUP-HAT*

PCR-HAT

0.1261 ± 0.1825aA

15301

21954

6074

PCR-CV

0.1240 ± 0.1870aA

 

21016

5474

PLSR-CV

0.1019 ± 0.1870bB

  

331

BLUP-HAT

0.1431 ± 0.1887cC

   
  1. Class labels a, b, or c denote significant differences between methods at level of p < 0.05
  2. Class labels A, B, or C denote significant differences between methods at level of p < 0.01
  3. *Indicates the number of gene expressions with higher predictive ability than BLUP-HAT for the methods listed in the first column
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